Peter L. Freddolino, Ph.D.
Affiliations: | 2009 | University of Illinois, Urbana-Champaign, Urbana-Champaign, IL |
Area:
theoretical biophysicsGoogle:
"Peter Freddolino"Mean distance: 8.65 | S | N | B | C | P |
Parents
Sign in to add mentor| Klaus Schulten | grad student | 2009 | UIUC | |
| (Application of all-atom and coarse-grained molecular dynamics simulations to long timescale structural transitions of proteins.) | ||||
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Publications
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| Ribeiro JV, Bernardi RC, Rudack T, et al. (2016) QwikMD - Integrative Molecular Dynamics Toolkit for Novices and Experts. Scientific Reports. 6: 26536 |
| Freddolino PL, Goodarzi H, Tavazoie S. (2014) Revealing the genetic basis of natural bacterial phenotypic divergence. Journal of Bacteriology. 196: 825-39 |
| Hottes AK, Freddolino PL, Khare A, et al. (2013) Bacterial adaptation through loss of function. Plos Genetics. 9: e1003617 |
| Freddolino PL, Gardner KH, Schulten K. (2013) Signaling mechanisms of LOV domains: new insights from molecular dynamics studies. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. 12: 1158-70 |
| Freddolino PL, Tavazoie S. (2012) The dawn of virtual cell biology. Cell. 150: 248-50 |
| Liu Y, Strümpfer J, Freddolino PL, et al. (2012) Structural Characterization of λ-Repressor Folding from All-Atom Molecular Dynamics Simulations. The Journal of Physical Chemistry Letters. 3: 1117-1123 |
| Freddolino PL, Goodarzi H, Tavazoie S. (2012) Fitness landscape transformation through a single amino acid change in the rho terminator. Plos Genetics. 8: e1002744 |
| Freddolino PL, Tavazoie S. (2012) Beyond homeostasis: a predictive-dynamic framework for understanding cellular behavior. Annual Review of Cell and Developmental Biology. 28: 363-84 |
| Freddolino PL, Amini S, Tavazoie S. (2012) Newly identified genetic variations in common Escherichia coli MG1655 stock cultures. Journal of Bacteriology. 194: 303-6 |
| Schreiner E, Trabuco LG, Freddolino PL, et al. (2011) Stereochemical errors and their implications for molecular dynamics simulations. Bmc Bioinformatics. 12: 190 |