Mehmet S. Apaydin, Ph.D.

Affiliations: 
2004 Stanford University, Palo Alto, CA 
Area:
Bioinformatics
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"Mehmet Apaydin"
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SNBCP

Parents

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Douglas L. Brutlag grad student 2004 Stanford
 (Stochastic roadmap simulation: An efficient representation and algorithm for analyzing molecular motion.)
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Publications

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Çetinkaya Ş, Ekren ŞN, Apaydin MS. (2016) Progress in Nuclear Vector Replacement for NMR Protein Structure-Based Assignments Rairo - Operations Research. 50: 341-349
Ekren SN, Apaydin MS. (2014) Incorporating triple resonance experiment data into NVR for NMR protein structure-based assignments | NMR protein yapi tabanli atama programi nvrin üçlü rezonans deney verisini kabul edecek şekilde geliştirilmesi 2014 22nd Signal Processing and Communications Applications Conference, Siu 2014 - Proceedings. 1926-1929
Aslanov J, Çatay B, Apaydin MS. (2013) An ant colony optimization approach for solving the nuclear magnetic resonance structure based assignment problem Gecco 2013 - Proceedings of the 2013 Genetic and Evolutionary Computation Conference Companion. 1609-1615
Akhmedov M, Çatay B, Apaydin MS. (2013) Distinguishing the type of NOE for NMR protein structure-based assignments 2013 21st Signal Processing and Communications Applications Conference, Siu 2013
Cavuşlar G, Çatay B, Apaydın MS. (2012) A tabu search approach for the NMR protein structure-based assignment problem. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 9: 1621-8
Erdoǧan H, Apaydin MS. (2012) Incorporating amino acid typing into Nuclear Magnetic Resonance protein structure-based assignments Journal of Proteomics and Bioinformatics. 5: 116-121
Apaydin MS, Çatay B, Patrick N, et al. (2011) NVR-BIP: Nuclear Vector Replacement using Binary Integer Programming for NMR Structure-Based Assignments. The Computer Journal. 54: 708-716
Erdoǧan H, Apaydin MS. (2010) Using amino acid typing to improve the accuracy of NMR structure based assignments 2010 5th International Symposium On Health Informatics and Bioinformatics, Hibit 2010. 206-210
Çalpur MC, Erdoǧan H, Çatay B, et al. (2010) Developing a scoring function for NMR structure-based assignments using machine learning Lecture Notes in Electrical Engineering. 62: 87-90
Apaydin MS, Conitzer V, Donald BR. (2008) Structure-based protein NMR assignments using native structural ensembles. Journal of Biomolecular Nmr. 40: 263-76
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