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Gloria M. Sheynkman, Ph.D.

Affiliations: 
2014 Chemistry University of Wisconsin, Madison, Madison, WI 
Area:
surface chemistry, mass spectrometry
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"Gloria Sheynkman"
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Lloyd M. Smith grad student 2014 UW Madison
 (Leveraging RNA-Seq to detect novel protein variations via mass spectrometry.)

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Publications

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Korchak JA, Jeffery ED, Bandyopadhyay S, et al. (2024) IS-PRM-Based Peptide Targeting Informed by Long-Read Sequencing for Alternative Proteome Detection. Journal of the American Society For Mass Spectrometry
Bollon J, Shortreed MR, Jordan BT, et al. (2024) : a Bayesian approach for single-isoform proteomics inference. Biorxiv : the Preprint Server For Biology
Pardo-Palacios FJ, Wang D, Reese F, et al. (2024) Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Nature Methods
Korchak JA, Jeffery ED, Bandyopadhyay S, et al. (2024) IS-PRM-based peptide targeting informed by long-read sequencing for alternative proteome detection. Biorxiv : the Preprint Server For Biology
Murali M, Saquing J, Lu S, et al. (2024) Biosurfer for systematic tracking of regulatory mechanisms leading to protein isoform diversity. Biorxiv : the Preprint Server For Biology
Li G, Mahajan S, Ma S, et al. (2024) Splicing neoantigen discovery with SNAF reveals shared targets for cancer immunotherapy. Science Translational Medicine. 16: eade2886
Pardo-Palacios FJ, Wang D, Reese F, et al. (2023) Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. Biorxiv : the Preprint Server For Biology
de Souza VBC, Jordan BT, Tseng E, et al. (2023) Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data. Genome Biology. 24: 91
Abood A, Mesner LD, Jeffery ED, et al. (2023) Long-read proteogenomics to connect disease-associated sQTLs to the protein isoform effectors of disease. Biorxiv : the Preprint Server For Biology
Mehlferber MM, Jeffery ED, Saquing J, et al. (2022) Characterization of protein isoform diversity in human umbilical vein endothelial cells via long-read proteogenomics. Rna Biology. 19: 1228-1243
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