Sharon S. Chen, Ph.D.

Affiliations: 
2005 University of Washington, Seattle, Seattle, WA 
Area:
Proteomics
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"Sharon Chen"
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Ruedi Aebersold grad student 2005 University of Washington
 (Peptide sequence assignments by probabilistic peptide profile matching to an annotated peptide database.)
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Publications

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Lu YC, Chen CN, Chu CY, et al. (2014) Calreticulin activates β1 integrin via fucosylation by fucosyltransferase 1 in J82 human bladder cancer cells. The Biochemical Journal. 460: 69-78
Ke Z, He W, Lai Y, et al. (2014) Overexpression of collagen triple helix repeat containing 1 (CTHRC1) is associated with tumour aggressiveness and poor prognosis in human non-small cell lung cancer Oncotarget. 5: 9410-9424
Li X, LeBlanc J, Truong A, et al. (2011) A metaproteomic approach to study human-microbial ecosystems at the mucosal luminal interface. Plos One. 6: e26542
Rubbi L, Titz B, Brown L, et al. (2011) Global phosphoproteomics reveals crosstalk between Bcr-Abl and negative feedback mechanisms controlling Src signaling. Science Signaling. 4: ra18
Titz B, Low T, Komisopoulou E, et al. (2010) The proximal signaling network of the BCR-ABL1 oncogene shows a modular organization Oncogene. 29: 5895-5910
Zimman A, Chen SS, Komisopoulou E, et al. (2010) Activation of aortic endothelial cells by oxidized phospholipids: a phosphoproteomic analysis. Journal of Proteome Research. 9: 2812-24
Mallick P, Schirle M, Chen SS, et al. (2007) Computational prediction of proteotypic peptides for quantitative proteomics. Nature Biotechnology. 25: 125-31
Desiere F, Deutsch EW, King NL, et al. (2006) The PeptideAtlas project. Nucleic Acids Research. 34: D655-8
Chen SS, Deutsch EW, Yi EC, et al. (2005) Improving mass and liquid chromatography based identification of proteins using bayesian scoring. Journal of Proteome Research. 4: 2174-84
Chen SS, Aebersold R. (2005) LC-MS solvent composition monitoring and chromatography alignment using mobile phase tracer molecules. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 829: 107-14
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