Peter J. Ulintz, Ph.D.

Affiliations: 
2008 University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
proteomics
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"Peter Ulintz"
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Philip C. Andrews grad student 2008 University of Michigan
 (Mining deeper into the proteome: Computational strategies for improving depth and breadth of coverage in high -throughput protein identification studies.)
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Publications

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Xiao Y, Wang X, Zhang H, et al. (2020) FastClone is a probabilistic tool for deconvoluting tumor heterogeneity in bulk-sequencing samples. Nature Communications. 11: 4469
Aw Yong KM, Ulintz PJ, Caceres S, et al. (2020) Heterogeneity at the invasion front of triple negative breast cancer cells. Scientific Reports. 10: 5781
Ulintz PJ, Wu W, Gates CM. (2019) Bioinformatics Analysis of Whole Exome Sequencing Data. Methods in Molecular Biology (Clifton, N.J.). 1881: 277-318
Ulintz PJ, Yocum AK, Bodenmiller B, et al. (2009) Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification. Journal of Proteome Research. 8: 887-99
Chen X, Ulintz PJ, Simon ES, et al. (2008) Global topology analysis of pancreatic zymogen granule membrane proteins. Molecular & Cellular Proteomics : McP. 7: 2323-36
Ulintz PJ, Bodenmiller B, Andrews PC, et al. (2008) Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence. Molecular & Cellular Proteomics : McP. 7: 71-87
Fermin D, Allen BB, Blackwell TW, et al. (2006) Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics. Genome Biology. 7: R35
Ulintz PJ, Zhu J, Qin ZS, et al. (2006) Improved classification of mass spectrometry database search results using newer machine learning approaches. Molecular & Cellular Proteomics : McP. 5: 497-509
Falkner JA, Ulintz PJ, Andrews PC. (2006) A code and data archival and dissemination tool for the proteomics community American Biotechnology Laboratory. 24: 28-30
Phadke ND, Molloy MP, Steinhoff SA, et al. (2001) Analysis of the outer membrane proteome of Caulobacter crescentus by two-dimensional electrophoresis and mass spectrometry. Proteomics. 1: 705-20
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