Lochana C. Menikarachchi, Ph.D.

Affiliations: 
2006-2011 Chemistry University of Connecticut, Storrs, CT, United States 
 2015- Pharmacy University of Peradeniya, Kandy, Sri Lanka 
Area:
proteins and biomaterials
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"Lochana Menikarachchi"
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Parents

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Jose Gascon grad student 2011 University of Connecticut
 (Fragmentation and Moving Domain Methods for the Computation of Electrostatic Potentials in Proteins.)
David F. Grant post-doc University of Connecticut

Children

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Muditha Dias Weerasingha grad student (Computer Science Tree)
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Publications

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Menikarachchi LC, Dubey R, Hill DW, et al. (2016) Development of Database Assisted Structure Identification (DASI) Methods for Nontargeted Metabolomics. Metabolites. 6
Hall LM, Hill DW, Menikarachchi LC, et al. (2015) Optimizing artificial neural network models for metabolomics and systems biology: an example using HPLC retention index data. Bioanalysis. 7: 939-55
Paglia G, Angel P, Williams JP, et al. (2015) Ion mobility-derived collision cross section as an additional measure for lipid fingerprinting and identification. Analytical Chemistry. 87: 1137-44
Paglia G, Williams JP, Menikarachchi L, et al. (2014) Ion mobility derived collision cross sections to support metabolomics applications. Analytical Chemistry. 86: 3985-93
Menikarachchi LC, Hamdalla MA, Hill DW, et al. (2013) Chemical structure identification in metabolomics: computational modeling of experimental features. Computational and Structural Biotechnology Journal. 5: e201302005
Menikarachchi LC, Hill DW, Hamdalla MA, et al. (2013) In silico enzymatic synthesis of a 400,000 compound biochemical database for nontargeted metabolomics. Journal of Chemical Information and Modeling. 53: 2483-92
Menikarachchi LC, Cawley S, Hill DW, et al. (2012) MolFind: a software package enabling HPLC/MS-based identification of unknown chemical structures. Analytical Chemistry. 84: 9388-94
Menikarachchi LC, Gascón JA. (2011) An extrapolation method for computing protein solvation energies based on density fragmentation of a graphical surface tessellation. Journal of Molecular Graphics & Modelling. 30: 38-45
Beshir AB, Argueta CE, Menikarachchi LC, et al. (2011) Locostatin Disrupts Association of Raf Kinase Inhibitor Protein With Binding Proteins by Modifying a Conserved Histidine Residue in the Ligand-Binding Pocket. Forum On Immunopathological Diseases and Therapeutics. 2: 47-58
Menikarachchi LC, Gascón JA. (2010) QM/MM approaches in medicinal chemistry research. Current Topics in Medicinal Chemistry. 10: 46-54
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