Konstantin Berlin, Ph.D.
Affiliations: | 2010 | Computer Science | University of Maryland, College Park, College Park, MD |
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"Konstantin Berlin"Mean distance: 15925.2
Parents
Sign in to add mentor| David Fushman | grad student | 2010 | University of Maryland | |
| (Protein-protein docking using long range nuclear magnetic resonance constraints.) | ||||
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Publications
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| Koren S, Walenz BP, Berlin K, et al. (2017) Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. Genome Research |
| Andrałojć W, Berlin K, Fushman D, et al. (2015) Information content of long-range NMR data for the characterization of conformational heterogeneity. Journal of Biomolecular Nmr. 62: 353-71 |
| Berlin K, Gumerov NA, Fushman D, et al. (2014) Hierarchical O(N) computation of small-angle scattering profiles and their associated derivatives. Journal of Applied Crystallography. 47: 755-761 |
| Berlin K, Longhini A, Dayie TK, et al. (2013) Deriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface. Journal of Biomolecular Nmr. 57: 333-52 |
| Berlin K, Castañeda CA, Schneidman-Duhovny D, et al. (2013) Recovering a representative conformational ensemble from underdetermined macromolecular structural data. Journal of the American Chemical Society. 135: 16595-609 |
| Gumerov NA, Berlin K, Fushman D, et al. (2012) A hierarchical algorithm for fast Debye summation with applications to small angle scattering. Journal of Computational Chemistry. 33: 1981-96 |
| Berlin K, O'Leary DP, Fushman D. (2011) Fast approximations of the rotational diffusion tensor and their application to structural assembly of molecular complexes. Proteins. 79: 2268-81 |
| Berlin K, O'Leary DP, Fushman D. (2010) Structural assembly of molecular complexes based on residual dipolar couplings. Journal of the American Chemical Society. 132: 8961-72 |
| Berlin K, O'Leary DP, Fushman D. (2009) Improvement and analysis of computational methods for prediction of residual dipolar couplings. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 201: 25-33 |