Arash Bahrami

Affiliations: 
2003-2009 Biophysics University of Wisconsin, Madison, Madison, WI 
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"Arash Bahrami"
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John L. Markley grad student 2003-2009 UW Madison
 (A probabilistic approach to the automation of NMR protein structure determination.)
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Publications

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Lee W, Bahrami A, Dashti HT, et al. (2019) I-PINE web server: an integrative probabilistic NMR assignment system for proteins. Journal of Biomolecular Nmr
Tonelli M, Eller CH, Singarapu KK, et al. (2015) Assignments of RNase A by ADAPT-NMR and enhancer. Biomolecular Nmr Assignments. 9: 81-8
Lee W, Hu K, Tonelli M, et al. (2013) Fast automated protein NMR data collection and assignment by ADAPT-NMR on Bruker spectrometers. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 236: 83-8
Lee W, Bahrami A, Markley JL. (2013) ADAPT-NMR Enhancer: complete package for reduced dimensionality in protein NMR spectroscopy. Bioinformatics (Oxford, England). 29: 515-7
Bahrami A, Tonelli M, Sahu SC, et al. (2012) Robust, integrated computational control of NMR experiments to achieve optimal assignment by ADAPT-NMR. Plos One. 7: e33173
Bahrami A, Clos LJ, Markley JL, et al. (2012) RNA-PAIRS: RNA probabilistic assignment of imino resonance shifts. Journal of Biomolecular Nmr. 52: 289-302
Lee W, Westler WM, Bahrami A, et al. (2009) PINE-SPARKY: graphical interface for evaluating automated probabilistic peak assignments in protein NMR spectroscopy. Bioinformatics (Oxford, England). 25: 2085-7
Bahrami A, Assadi AH, Markley JL, et al. (2009) Probabilistic interaction network of evidence algorithm and its application to complete labeling of peak lists from protein NMR spectroscopy. Plos Computational Biology. 5: e1000307
Cornilescu G, Bahrami A, Tonelli M, et al. (2007) HIFI-C: a robust and fast method for determining NMR couplings from adaptive 3D to 2D projections. Journal of Biomolecular Nmr. 38: 341-51
Assadi A, Bahrami A, Montgomery E, et al. (2007) Features of network oscillations in data from single-channel neuronal recording Bmc Neuroscience. 8
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