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Chi H. Ngan, Ph.D.

Affiliations: 
2012 Boston University, Boston, MA, United States 
Area:
Biomedical Engineering
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Sandor Vajda grad student 2012 Boston University
 (Identification and analysis of ligand binding sites by computational mapping.)

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Lavi A, Ngan CH, Movshovitz-Attias D, et al. (2013) Detection of peptide-binding sites on protein surfaces: the first step toward the modeling and targeting of peptide-mediated interactions. Proteins. 81: 2096-105
Bohnuud T, Beglov D, Ngan C, et al. (2013) 89 Computational mapping reveals effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde Journal of Biomolecular Structure and Dynamics. 31: 57-57
Bohnuud T, Beglov D, Ngan CH, et al. (2012) Computational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde. Nucleic Acids Research. 40: 7644-52
Ngan CH, Bohnuud T, Mottarella SE, et al. (2012) FTMAP: extended protein mapping with user-selected probe molecules. Nucleic Acids Research. 40: W271-5
Hall DR, Ngan CH, Zerbe BS, et al. (2012) Hot spot analysis for driving the development of hits into leads in fragment-based drug discovery. Journal of Chemical Information and Modeling. 52: 199-209
Ngan CH, Hall DR, Zerbe B, et al. (2012) FTSite: high accuracy detection of ligand binding sites on unbound protein structures. Bioinformatics (Oxford, England). 28: 286-7
Hall DH, Grove LE, Yueh C, et al. (2011) Robust identification of binding hot spots using continuum electrostatics: application to hen egg-white lysozyme. Journal of the American Chemical Society. 133: 20668-71
Chuang GY, Mehra-Chaudhary R, Ngan CH, et al. (2010) Domain motion and interdomain hot spots in a multidomain enzyme. Protein Science : a Publication of the Protein Society. 19: 1662-72
Ngan CH, Beglov D, Rudnitskaya AN, et al. (2009) The structural basis of pregnane X receptor binding promiscuity. Biochemistry. 48: 11572-81
Landon MR, Amaro RE, Baron R, et al. (2008) Novel druggable hot spots in avian influenza neuraminidase H5N1 revealed by computational solvent mapping of a reduced and representative receptor ensemble. Chemical Biology & Drug Design. 71: 106-16
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