David L. Masica, Ph.D.

Affiliations: 
2009 Johns Hopkins University, Baltimore, MD 
Area:
General Biophysics
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Parents

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Jeffrey J. Gray grad student 2009 Johns Hopkins (Computational Biology Tree)
 (Structure determination and design of biomineral -associated proteins.)
Jan H. Hoh grad student 2009 Johns Hopkins
 (Structure determination and design of biomineral -associated proteins.)
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Publications

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Kasak L, Bakolitsa C, Hu Z, et al. (2019) Assessing Computational Predictions of the Phenotypic Effect of Cystathionine-beta-Synthase Variants. Human Mutation
Beleva Guthrie V, Masica DL, Fraser A, et al. (2018) Network Analysis of Protein Adaptation: modeling the functional impact of multiple mutations. Molecular Biology and Evolution
Guidugli L, Shimelis H, Masica DL, et al. (2018) Assessment of the Clinical Relevance of BRCA2 Missense Variants by Functional and Computational Approaches. American Journal of Human Genetics
Glusman G, Rose PW, Prlić A, et al. (2017) Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework. Genome Medicine. 9: 113
Tokheim C, Bhattacharya R, Niknafs N, et al. (2016) Exome-scale discovery of hotspot mutation regions in human cancer using 3D protein structure. Cancer Research
Masica DL, Karchin R. (2016) Towards Increasing the Clinical Relevance of In Silico Methods to Predict Pathogenic Missense Variants. Plos Computational Biology. 12: e1004725
Douville C, Masica DL, Stenson PD, et al. (2015) Assessing the Pathogenicity of Insertion and Deletion Variants with the Variant Effect Scoring Tool (VEST-Indel). Human Mutation
Masica DL, Sosnay PR, Raraigh KS, et al. (2015) Missense variants in CFTR nucleotide-binding domains predict quantitative phenotypes associated with cystic fibrosis disease severity. Human Molecular Genetics. 24: 1908-17
Masica DL, Li S, Douville C, et al. (2015) Predicting survival in head and neck squamous cell carcinoma from TP53 mutation. Human Genetics. 134: 497-507
Masica D, Li S, Douville C, et al. (2014) Evaluation of computational tools to determine prognostic significance of TP53 mutation in head and neck squamous cell carcinoma (HNSCC). Journal of Clinical Oncology. 32: 6035-6035
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