Tugba G. Kucukkal, Ph.D.
Affiliations: | 2013 | Chemistry | Clemson University, Clemson, SC, United States |
Area:
General Chemistry, Physical Chemistry, Molecular ChemistryGoogle:
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Parents
Sign in to add mentorSteven J. Stuart | grad student | 2013 | Clemson University | |
(Molecular dynamics simulations using advanced sampling and polarizable force fields.) |
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Publications
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Kucukkal TG, Alsaiari F, Stuart SJ. (2018) Modeling ion permeation in wild-type and mutant human α7 nachr ion channels Journal of Theoretical and Computational Chemistry. 17: 1850045 |
Peng Y, Suryadi J, Yang Y, et al. (2015) Mutations in the KDM5C ARID Domain and Their Plausible Association with Syndromic Claes-Jensen-Type Disease. International Journal of Molecular Sciences. 16: 27270-27287 |
Kucukkal T, Yang Y, Uvarov O, et al. (2015) Impact of Rett Syndrome Mutations on MeCP2 MBD Stability. Biochemistry |
Kucukkal TG, Alexov E. (2015) Structural, Dynamical, and Energetical Consequences of Rett Syndrome Mutation R133C in MeCP2. Computational and Mathematical Methods in Medicine. 2015: 746157 |
Petukh M, Kucukkal TG, Alexov E. (2015) On human disease-causing amino acid variants: statistical study of sequence and structural patterns. Human Mutation. 36: 524-34 |
Kucukkal TG, Petukh M, Li L, et al. (2015) Structural and physico-chemical effects of disease and non-disease nsSNPs on proteins. Current Opinion in Structural Biology. 32: 18-24 |
Kucukkal TG, Yang Y, Chapman SC, et al. (2014) Computational and experimental approaches to reveal the effects of single nucleotide polymorphisms with respect to disease diagnostics. International Journal of Molecular Sciences. 15: 9670-717 |
Kucukkal TG, Stuart SJ. (2012) Polarizable molecular dynamics simulations of aqueous dipeptides. The Journal of Physical Chemistry. B. 116: 8733-40 |
Biswas PK, Vellore NA, Yancey JA, et al. (2012) Simulation of multiphase systems utilizing independent force fields to control intraphase and interphase behavior. Journal of Computational Chemistry. 33: 1458-66 |
Abramyan T, Collier G, Kucukkal TG, et al. (2012) Understanding protein-surface interactions at the atomistic level through the synergistic development of experimental and molecular simulation methods Acs Symposium Series. 1120: 197-228 |