Prasenjit Mukherjee, Ph.D.

Affiliations: 
2008 The University of Mississippi, USA 
Area:
Pharmaceutical Chemistry
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Mitchell Allen Avery grad student 2008 The University of Mississippi
 (Use of molecular modeling tools in the elucidation of ligand -macromolecular interactions and applications in structure -based drug design.)
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Publications

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Martin E, Mukherjee P, Tian L, et al. (2013) Abstract SY20-02: Discovering tool compounds and chemistry leads by highly accurate kinase virtual screening.: Cancer Research. 73
Mukherjee P, Martin E. (2012) Profile-QSAR and Surrogate AutoShim protein-family modeling of proteases. Journal of Chemical Information and Modeling. 52: 2430-40
Martin E, Mukherjee P. (2012) Kinase-kernel models: accurate in silico screening of 4 million compounds across the entire human kinome. Journal of Chemical Information and Modeling. 52: 156-70
Martin E, Mukherjee P, Sullivan D, et al. (2011) Profile-QSAR: a novel meta-QSAR method that combines activities across the kinase family to accurately predict affinity, selectivity, and cellular activity. Journal of Chemical Information and Modeling. 51: 1942-56
Mukherjee P, Shah F, Desai P, et al. (2011) Inhibitors of SARS-3CLpro: virtual screening, biological evaluation, and molecular dynamics simulation studies. Journal of Chemical Information and Modeling. 51: 1376-92
Shah F, Mukherjee P, Gut J, et al. (2011) Identification of novel malarial cysteine protease inhibitors using structure-based virtual screening of a focused cysteine protease inhibitor library. Journal of Chemical Information and Modeling. 51: 852-64
Mukherjee P, Desai P, Zhou YD, et al. (2010) Targeting the BH3 domain mediated protein-protein interaction of Bcl-xL through virtual screening. Journal of Chemical Information and Modeling. 50: 906-23
Shah F, Mukherjee P, Desai P, et al. (2010) Computational approaches for the discovery of cysteine protease inhibitors against malaria and SARS. Current Computer-Aided Drug Design. 6: 1-23
Pradhan A, Tripathi AK, Desai PV, et al. (2009) Structure and function of Plasmodium falciparum malate dehydrogenase: role of critical amino acids in co-substrate binding pocket. Biochimie. 91: 1509-17
Shah F, Zhang SQ, Kandhari SP, et al. (2009) In vitro erythrocytic uptake studies of artemisinin and selected derivatives using LC-MS and 2D-QSAR analysis of uptake in parasitized erythrocytes. Bioorganic & Medicinal Chemistry. 17: 5325-31
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