David L. Bernick, Ph.D.

2010 Biomolecular Engineering University of California, Santa Cruz, Santa Cruz, CA, United States 
Molecular Biology, Virology Biology, Bioinformatics Biology
"David Bernick"
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Todd Lowe grad student 2010 UC Santa Cruz
 (Sequential discovery - from small RNA to genomes, and investigation of the hyperthermophilic genus Pyrobaculum.)
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Lui LM, Uzilov AV, Bernick DL, et al. (2018) Methylation guide RNA evolution in archaea: structure, function and genomic organization of 110 C/D box sRNA families across six Pyrobaculum species. Nucleic Acids Research
Draper JL, Hansen LM, Bernick DL, et al. (2017) Fallacy of the Unique Genome: Sequence Diversity within Single Helicobacter pylori Strains. Mbio. 8
Smith AM, Abu-Shumays R, Akeson M, et al. (2015) Capture, Unfolding, and Detection of Individual tRNA Molecules Using a Nanopore Device. Frontiers in Bioengineering and Biotechnology. 3: 91
Miller HK, Kwuan L, Schwiesow L, et al. (2014) IscR is essential for yersinia pseudotuberculosis type III secretion and virulence. Plos Pathogens. 10: e1004194
Bernick DL, Karplus K, Lui LM, et al. (2012) Complete genome sequence of Pyrobaculum oguniense. Standards in Genomic Sciences. 6: 336-45
Bernick DL, Cox CL, Dennis PP, et al. (2012) Comparative genomic and transcriptional analyses of CRISPR systems across the genus Pyrobaculum. Frontiers in Microbiology. 3: 251
Bernick DL, Dennis PP, Lui LM, et al. (2012) Diversity of Antisense and Other Non-Coding RNAs in Archaea Revealed by Comparative Small RNA Sequencing in Four Pyrobaculum Species. Frontiers in Microbiology. 3: 231
Zargar K, Conrad A, Bernick DL, et al. (2012) ArxA, a new clade of arsenite oxidase within the DMSO reductase family of molybdenum oxidoreductases. Environmental Microbiology. 14: 1635-45
Bernick DL, Dennis PP, Höchsmann M, et al. (2012) Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide RNA features. Rna (New York, N.Y.). 18: 402-11
Lai LB, Chan PP, Cozen AE, et al. (2010) Discovery of a minimal form of RNase P in Pyrobaculum. Proceedings of the National Academy of Sciences of the United States of America. 107: 22493-8
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