Arjan van der Vaart

Affiliations: 
2006-2009 Chemistry Arizona State University, Tempe, AZ, United States 
 2009- Chemistry University of South Florida, Tampa, FL, United States 
Area:
General Biophysics, Biochemistry
Website:
http://chemistry.usf.edu/faculty/vandervaart/
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"Arjan van der Vaart"
Bio:

http://chemistry.usf.edu/faculty/data/CV-Arjan_van_der_Vaart.pdf

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Parents

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Herman J.C. Berendsen grad student 1995 RUG
 (M.S.)
Kenneth M. Merz, Jr. grad student 2001 Penn State
 (A semiempirical study of biomolecular solvation.)
Martin Karplus post-doc 2001-2005 Harvard
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Publications

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Bachman AB, Keramisanou D, Xu W, et al. (2018) Phosphorylation induced cochaperone unfolding promotes kinase recruitment and client class-specific Hsp90 phosphorylation. Nature Communications. 9: 265
Shi Y, Challa S, Sang P, et al. (2017) One-Bead-Two-Compound Thioether Bridged Macrocyclic γ-AApeptide Screening Library against EphA2. Journal of Medicinal Chemistry. 60: 9290-9298
Ma N, van der Vaart A. (2017) Free Energy Coupling between DNA Bending and Base Flipping. Journal of Chemical Information and Modeling. 57: 2020-2026
Ma N, van der Vaart A. (2017) [KCl] Dependence of B-DNA Groove Bending Anisotropy. The Journal of Physical Chemistry. B. 121: 5322-5330
Teng P, Ma N, Cerrato DC, et al. (2017) Right-Handed Helical Foldamers Consisting of De Novo d-AApeptides. Journal of the American Chemical Society. 139: 7363-7369
Gray GM, Ma N, Wagner CE, et al. (2017) Molecular dynamics simulations and molecular flooding studies of the retinoid X-receptor ligand binding domain. Journal of Molecular Modeling. 23: 98
Peguero-Tejada A, van der Vaart A. (2017) Biasing Simulations of DNA Base Pair Parameters with Application to Propellor Twisting in AT/AT, AA/TT, and AC/GT Steps and Their Uracil Analogs. Journal of Chemical Information and Modeling. 57: 85-92
van der Vaart A, Lorkowski A, Ma N, et al. (2017) Computer Simulations of the Retinoid X Receptor: Conformational Dynamics and Allosteric Networks. Current Topics in Medicinal Chemistry. 17: 731-741
Gray GM, van der Vaart A, Guo C, et al. (2016) Secondary Structure Adopted by the Gly-Gly-X Repetitive Regions of Dragline Spider Silk. International Journal of Molecular Sciences. 17
Heck MC, Wagner CE, Shahani PH, et al. (2016) Modeling, Synthesis, and Biological Evaluation of Potential Retinoid X Receptor (RXR)-Selective Agonists: Analogues of 4-[1-(3,5,5,8,8-Pentamethyl-5,6,7,8-tetrahydro-2-naphthyl)ethynyl]benzoic Acid (Bexarotene) and 6-(Ethyl(5,5,8,8-tetrahydronaphthalen-2-yl)amino)nicotinic Acid (NEt-TMN). Journal of Medicinal Chemistry. 59: 8924-8940
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