Juan R. Perilla, Ph.D.

Affiliations: 
2017- University of Delaware, Newark, DE, United States 
Area:
General Biophysics, Physical Chemistry, Molecular Biology
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"Juan Perilla"
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Parents

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Tom Woolf grad student 2011 Johns Hopkins (Neurotree)
 (Computing Transitions from Stable States.)
Klaus Schulten post-doc UIUC
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Publications

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Jones PE, Pérez-Segura C, Bryer AJ, et al. (2021) Molecular dynamics of the viral life cycle: progress and prospects. Current Opinion in Virology. 50: 128-138
Thames T, Bryer AJ, Qiao X, et al. (2021) Curvature of the Retroviral Capsid Assembly Is Modulated by a Molecular Switch. The Journal of Physical Chemistry Letters. 7768-7776
Perilla JR, Hadden-Perilla JA, Gronenborn AM, et al. (2021) Integrative structural biology of HIV-1 capsid protein assemblies: combining experiment and computation. Current Opinion in Virology. 48: 57-64
Segura CP, Katyal N, González-Arias F, et al. (2020) Coronavirus through Delaware's Computational Microscope. Delaware Journal of Public Health. 6: 6-9
González-Arias F, Reddy T, Stone JE, et al. (2020) Scalable Analysis of Authentic Viral Envelopes on FRONTERA. Computing in Science & Engineering. 22: 11-20
Xu C, Fischer DK, Rankovic S, et al. (2020) Permeability of the HIV-1 capsid to metabolites modulates viral DNA synthesis. Plos Biology. 18: e3001015
Xu C, Katyal N, Nesterova T, et al. (2020) Molecular determinants of Ebola nucleocapsid stability from molecular dynamics simulations. The Journal of Chemical Physics. 153: 155102
Lu M, Russell RW, Bryer AJ, et al. (2020) Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR. Nature Structural & Molecular Biology. 27: 863-869
Wright E, Ferrato M, Bryer AJ, et al. (2020) Accelerating prediction of chemical shift of protein structures on GPUs: Using OpenACC. Plos Computational Biology. 16: e1007877
Dick RA, Xu C, Morado DR, et al. (2020) Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly. Plos Pathogens. 16: e1008277
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