Danica G. Fujimori

Affiliations: 
Chemistry and Chemical Biology University of California, San Francisco, San Francisco, CA 
Area:
Biochemistry, Molecular Biology, General Chemistry
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"Danica Fujimori"
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Children

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Carrie Shiau grad student 2012 UCSF
Daniel D. Le grad student 2013 UCSF
Christina M Fitzsimmons grad student 2011-2016 UCSF
Kevin P. McCusker post-doc 2010- UCSF
Vanja Stojkovic post-doc 2013- UCSF
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Publications

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Schaenzer AJ, Rodriguez Hernandez A, Tsai K, et al. (2023) Angucyclinones rescue PhLOPS antibiotic activity by inhibiting Cfr-dependent antibiotic resistance. Mbio. 14: e0179123
Sarah L, Fujimori DG. (2023) Recent developments in catalysis and inhibition of the Jumonji histone demethylases. Current Opinion in Structural Biology. 83: 102707
Tsai K, Stojković V, Lee DJ, et al. (2022) Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics. Nature Structural & Molecular Biology. 29: 162-171
Tsai K, Stojković V, Noda-Garcia L, et al. (2022) Directed evolution of the rRNA methylating enzyme Cfr reveals molecular basis of antibiotic resistance. Elife. 11
Stojković V, Weinberg DE, Fujimori DG. (2021) miCLIP-MaPseq Identifies Substrates of Radical SAM RNA-Methylating Enzyme Using Mechanistic Cross-Linking and Mismatch Profiling. Methods in Molecular Biology (Clifton, N.J.). 2298: 105-122
Longbotham JE, Zhang MY, Fujimori DG. (2020) Domain cross-talk in regulation of histone modifications: Molecular mechanisms and targeting opportunities. Current Opinion in Chemical Biology. 57: 105-113
Petronikolou N, Longbotham JE, Fujimori DG. (2020) Dissecting contributions of catalytic and reader domains in regulation of histone demethylation. Methods in Enzymology. 639: 217-236
Stojković V, Myasnikov AG, Young ID, et al. (2020) Assessment of the nucleotide modifications in the high-resolution cryo-electron microscopy structure of the Escherichia coli 50S subunit. Nucleic Acids Research
Petronikolou N, Longbotham JE, Fujimori DG. (2020) Extended Recognition of the Histone H3 Tail by Histone Demethylase KDM5A. Biochemistry. 59: 647-651
Stojković V, Ulate MF, Hidalgo-Villeda F, et al. (2019) cfr(B), (C), and a new -like gene, (E), in strains recovered across Latin America. Antimicrobial Agents and Chemotherapy
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