Harshad Ghodke, Ph.D.

Affiliations: 
2013 University of Pittsburgh, Pittsburgh, PA, United States 
Area:
General Biophysics, Biochemistry
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Bennett V. Houten grad student 2013 University of Pittsburgh
 (Single molecule studies of damaged recognition by the human UV-damaged DNA-binding protein (UV-DDB).)
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Publications

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Whinn KS, Sharma N, van Oijen AM, et al. (2023) Single-Molecule Fluorescence Imaging of DNA Replication Stalling at Sites of Nucleoprotein Complexes. Methods in Molecular Biology (Clifton, N.J.). 2694: 215-234
Cherry ME, Dubiel K, Henry C, et al. (2023) Spatiotemporal Dynamics of Single-stranded DNA Intermediates in . Biorxiv : the Preprint Server For Biology
Whinn KS, Xu ZQ, Jergic S, et al. (2023) Single-molecule visualization of stalled replication-fork rescue by the Escherichia coli Rep helicase. Nucleic Acids Research
Shaw AE, Kairamkonda S, Ghodke H, et al. (2022) Biochemical and single-molecule techniques to study accessory helicase resolution of R-loop proteins at stalled replication forks. Methods in Enzymology. 673: 191-225
Whinn KS, van Oijen AM, Ghodke H. (2021) Single-molecule studies of helicases and translocases in prokaryotic genome-maintenance pathways. Dna Repair. 108: 103229
Henrikus SS, Henry C, McGrath AE, et al. (2020) Single-molecule live-cell imaging reveals RecB-dependent function of DNA polymerase IV in double strand break repair. Nucleic Acids Research
Ghodke H, Ho HN, van Oijen AM. (2020) Single-molecule live-cell imaging visualizes parallel pathways of prokaryotic nucleotide excision repair. Nature Communications. 11: 1477
Ho HN, van Oijen AM, Ghodke H. (2020) Single-molecule imaging reveals molecular coupling between transcription and DNA repair machinery in live cells. Nature Communications. 11: 1478
Whinn KS, Kaur G, Lewis JS, et al. (2019) Nuclease dead Cas9 is a programmable roadblock for DNA replication. Scientific Reports. 9: 13292
Ho HN, Zalami D, Köhler J, et al. (2019) Identification of Multiple Kinetic Populations of DNA-Binding Proteins in Live Cells. Biophysical Journal
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