Martin Karplus

Affiliations:

Harvard University, Cambridge, MA, United States

Area:

electronic structure, geometry, and dynamics of molecules of chemical and biological interest

Website:

http://www.chem.harvard.edu/research/faculty/martin_karplus.php

Google:

"Martin Karplus"

Bio:

http://www.nasonline.org/member-directory/members/53964.html
http://resolver.caltech.edu/CaltechETD:etd-01072004-094608
http://dx.doi.org/10.1146/annurev.biophys.33.110502.133350
http://www.scribd.com/doc/75840698/Martin-Karplus-Molecular-Dynamics-of-Biological-Macromolecules-A-Brief-History-and-Perspective
The Nobel Prize in Chemistry 2013 was awarded jointly to Martin Karplus, Michael Levitt and Arieh Warshel "for the development of multiscale models for complex chemical systems".

Mean distance: 6.6

Tree Publications PubMed Report error

Parents

Linus Carl Pauling	grad student	1953	Caltech
(A quantum-mechanical discussion of the bifluoride ion)
Charles Alfred Coulson	post-doc		Oxford

Children

Martin J. Field	grad student
DAVID PERAHIA	grad student		Harvard
Lionel M. Raff	grad student	1964	Columbia
Bernie Shizgal	grad student	1968	Columbia
Gabriel Balint-Kurti	grad student	1969	Columbia
Paul W. Brumer	grad student	1972	Harvard
David L. Freeman	grad student	1973	Harvard
Attila L. Szabo	grad student	1973	Harvard
Klaus Schulten	grad student	1974	Harvard
David A. Case	grad student	1977	Harvard
Antonio C. Lasaga	grad student	1977	Harvard
Peter J. Rossky	grad student	1978	Harvard
Russell J. Hemley	grad student	1983	Harvard
Jeffrey C. Hoch	grad student	1976-1983	Harvard
David J. States	grad student	1977-1983	Harvard (Computational Biology Tree)
Rob D. Coalson	grad student	1984	Harvard (Astronomy Tree)
John Kuriyan	grad student	1986	MIT
Sangyoub Lee	grad student	1986	Harvard
Bruce Tidor	grad student	1990	Harvard
Benoit Roux	grad student	1985-1990	Harvard
Andrew D. Miranker	grad student	1992	Harvard
Carla Mattos	grad student	1993	MIT
Roland Dunbrack	grad student	1987-1993	Harvard (Computer Science Tree)
Collin M. Stultz	grad student	1997	Harvard
Herman W. T. van Vlijmen	grad student	1997	Harvard
Stefan Boresch	grad student	1990-1997	Harvard
Aaron R. Dinner	grad student	1999	Harvard
Erik-Robert Evensen	grad student	2000	Harvard
Dennis M. Vitkup	grad student	1994-2000	Harvard
Louis Kuchnir	grad student	2001	Harvard
Ryan B. Putzer	grad student	2005	Harvard
Bernard R Brooks	post-doc		Harvard
Barry H. Honig	post-doc		Harvard
Alexander D. MacKerell	post-doc
Stephen W. Michnick	post-doc		Harvard
Lawrence R. Pratt	post-doc		(E-Tree)
Jeremy C. Smith	post-doc		Harvard
Michele Vendruscolo	post-doc		(Computational Biology Tree)
Simone Conti	post-doc	2016-	Harvard
Palliakaranai Thirumalai Narasimhan	post-doc	1959-1962	Columbia
Cynthia J. Jameson	post-doc	1963-1964	Columbia
Lee G. Pedersen	post-doc	1966-1967	Harvard
R. Benny Gerber	post-doc	1968-1969	Harvard
Keiji Morokuma	post-doc	1968-1969	Harvard
Arieh Warshel	post-doc	1969-1972	Harvard
Robert R. Birge	post-doc	1973-1975	Harvard
J. Andrew McCammon	post-doc	1976-1978	Harvard
Ronald M. Levy	post-doc	1976-1980	Harvard
Axel Brunger	post-doc	1982-1983	Harvard
Russell J. Hemley	post-doc	1983-1984	Harvard
Charles L. Brooks	post-doc	1982-1985	Harvard
B. Montgomery Pettitt	post-doc	1983-1985	Harvard
Jiali Gao	post-doc	1987-1990	Harvard
John E. Straub	post-doc	1987-1990	Harvard
Jeffrey D. Evanseck	post-doc	1994	Harvard
Amedeo Caflisch	post-doc	1992-1994
Darrin M. York	post-doc	1997-1998	Université Louis Pasteur, Strasbourg
Yaoqi Zhou	post-doc	1995-2000	Harvard (Physics Tree)
Qiang Cui	post-doc	1997-2001	Harvard
Markus Meuwly	post-doc	2000-2002	Harvard
Ioan Andricioaei	post-doc	2003	Harvard
Alfonso Jaramillo	post-doc	2002-2003	Université Louis Pasteur and Harvard University (Physics Tree)
Yi Qin Gao	post-doc	2002-2004	Harvard
Yiqin Gao	post-doc	2002-2004	Harvard
Arjan van der Vaart	post-doc	2001-2005	Harvard
Jingzhi Pu	post-doc	2005-2010	Harvard
David L. Weaver	research scientist	1972	Harvard (Physics Tree)
Eugene I. Shakhnovich	research scientist	1991	Harvard
Alex MacKerell	research scientist	1988-1992	Harvard

Collaborators

Nicolas Winssinger

collaborator

BETA: Related publications

Publications

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Conti S, Karplus M. (2019) Estimation of the breadth of CD4bs targeting HIV antibodies by molecular modeling and machine learning. Plos Computational Biology. 15: e1006954
Buchko GW, Pulavarti SVSRK, Ovchinnikov V, et al. (2018) Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide-rich de novo designed peptides. Protein Science : a Publication of the Protein Society
Ovchinnikov V, Stone TA, Deber CM, et al. (2018) Structure of the multidrug transporter and its use for inhibitor peptide design. Proceedings of the National Academy of Sciences of the United States of America
El Hage K, Hédin F, Gupta PK, et al. (2018) Valid molecular dynamics simulations of human hemoglobin require a surprisingly large box size. Elife. 7
Ovchinnikov V, Louveau JE, Barton JP, et al. (2018) Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies. Elife. 7
Hwang W, Lang M, Karplus M. (2017) Kinesin motility driven by subdomain dynamics. Elife. 6
Klein M, Krivov SV, Ferrer AJ, et al. (2017) Exploratory search during directed navigation in C. elegans and Drosophila larva. Elife. 6
Meroz Y, Ovchinnikov V, Karplus M. (2017) Coexisting origins of subdiffusion in internal dynamics of proteins. Physical Review. E. 95: 062403
Ovchinnikov V, Nam K, Karplus M. (2016) A Simple and Accurate Method to Calculate Free Energy Profiles and Reaction Rates from Restrained Molecular Simulations of Diffusive Processes. The Journal of Physical Chemistry. B
Nam K, Pu J, Karplus M. (2014) Trapping the ATP binding state leads to a detailed understanding of the F1-ATPase mechanism. Proceedings of the National Academy of Sciences of the United States of America. 111: 17851-6