Thomas F. Miller

California Institute of Technology, Pasadena, CA 
Theory and simulation of chemical, biochemical, and soft matter systems
"Thomas Miller"
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Michael B. Hall research assistant 2000 Texas A & M
David C. Clary grad student 2005 Oxford
David Chandler post-doc 2008 UC Berkeley
William Hughes Miller post-doc 2008 UC Berkeley


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Roman Korol grad student 2018- Caltech
Bin Zhang grad student 2007-2012 Caltech
Jason D. Goodpaster grad student 2014 Caltech
Artur R. Menzeleev grad student 2014 Caltech
Joshua S. Kretchmer grad student 2015 Caltech
Nandini Ananth post-doc 2010-2012 Caltech
Bin Zhang post-doc 2012-2013 Caltech
Leanne D Chen post-doc 2017-2019 Caltech
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Korol R, Bou-Rabee N, Miller TF. (2019) Cayley modification for strongly stable path-integral and ring-polymer molecular dynamics. The Journal of Chemical Physics. 151: 124103
Jiang H, Kammler M, Ding F, et al. (2019) Imaging covalent bond formation by H atom scattering from graphene. Science (New York, N.Y.). 364: 379-382
Lee SJR, Welborn M, Manby FR, et al. (2019) Projection-Based Wavefunction-in-DFT Embedding. Accounts of Chemical Research
Niesen MJM, Müller-Lucks A, Hedman R, et al. (2018) Forces on Nascent Polypeptides during Membrane Insertion and Translocation via the Sec Translocon. Biophysical Journal
Welborn M, Manby FR, Miller TF. (2018) Even-handed subsystem selection in projection-based embedding. The Journal of Chemical Physics. 149: 144101
Kretchmer JS, Boekelheide N, Warren JJ, et al. (2018) Fluctuating hydrogen-bond networks govern anomalous electron transfer kinetics in a blue copper protein. Proceedings of the National Academy of Sciences of the United States of America
Niesen MJM, Marshall SS, Miller TF, et al. (2017) Improving membrane protein expression by optimizing integration efficiency. The Journal of Biological Chemistry
Ding F, Tsuchiya T, Manby FR, et al. (2017) Linear-response time-dependent embedded mean-field theory. Journal of Chemical Theory and Computation
Niesen MJ, Wang CY, Van Lehn RC, et al. (2017) Structurally detailed coarse-grained model for Sec-facilitated co-translational protein translocation and membrane integration. Plos Computational Biology. 13: e1005427
Pennifold RC, Bennie SJ, Miller TF, et al. (2017) Correcting density-driven errors in projection-based embedding. The Journal of Chemical Physics. 146: 084113
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