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Shoshana J Wodak

Affiliations: 
1974 VIB-VUB Brussels Belgium 
Area:
Molecular simulations, biophysics, bioinformatics, protei-protein interaction, proteomics
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"Shoshana Wodak"
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Parents

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Cyrus Levinthal grad student 1968-1974 Columbia
 (My PhD Thesis advisor, and Post Doctoral advisor)

Children

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Alfonso Jaramillo post-doc 1999-2002 ULB (Physics Tree)
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Publications

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Wodak SJ, Janin J. (2016) Modeling protein assemblies: CAPRI 15 years hence 6(th) CAPRI evaluation meeting April 17-19 Tel-Aviv Israel. Proteins
Lensink MF, Velankar S, Kryshtafovych A, et al. (2016) Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment. Proteins
Marcon E, Jain H, Bhattacharya A, et al. (2015) Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation. Nature Methods
Pu S, Vlasblom J, Turinsky A, et al. (2015) Extracting high confidence protein interactions from affinity purification data: at the crossroads. Journal of Proteomics. 118: 63-80
Qiao W, Wang W, Laurenti E, et al. (2014) Intercellular network structure and regulatory motifs in the human hematopoietic system. Molecular Systems Biology. 10: 741
Marcon E, Ni Z, Pu S, et al. (2014) Human-chromatin-related protein interactions identify a demethylase complex required for chromosome segregation. Cell Reports. 8: 297-310
Turinsky AL, Razick S, Turner B, et al. (2014) Navigating the global protein-protein interaction landscape using iRefWeb. Methods in Molecular Biology (Clifton, N.J.). 1091: 315-31
Lensink MF, Moal IH, Bates PA, et al. (2014) Blind prediction of interfacial water positions in CAPRI. Proteins. 82: 620-32
Moretti R, Fleishman SJ, Agius R, et al. (2013) Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions. Proteins. 81: 1980-7
Grafodatskaya D, Chung BH, Butcher DT, et al. (2013) Multilocus loss of DNA methylation in individuals with mutations in the histone H3 lysine 4 demethylase KDM5C. Bmc Medical Genomics. 6: 1
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