Donald C. Rio
Affiliations: | Molecular and Cell Biology | University of California, Berkeley, Berkeley, CA, United States |
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Children
Sign in to add trainee| Alex Sabogal | grad student | 2010 | UC Berkeley |
| grad student | 2007-2012 | UC Berkeley (Computational Biology Tree) |
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Publications
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| Lee YJ, Rio DC. (2024) A mutation in the low-complexity domain of splicing factor hnRNPA1 linked to amyotrophic lateral sclerosis disrupts distinct neuronal RNA splicing networks. Genes & Development |
| Ghanim GE, Rio DC, Teixeira FK. (2020) Mechanism and regulation of P element transposition. Open Biology. 10: 200244 |
| Ghanim GE, Kellogg EH, Nogales E, et al. (2019) Structure of a P element transposase-DNA complex reveals unusual DNA structures and GTP-DNA contacts. Nature Structural & Molecular Biology |
| Kellogg EH, Ghanim G, Nogales E, et al. (2019) Towards a Mechanistic Understanding of P element Transposition Using Single-Particle Cryo-EM Microscopy and Microanalysis. 25: 1288-1289 |
| Kellogg EH, Ghanim G, Nogales E, et al. (2019) Cryo-EM Structure of the P-Element Transposase Strand-Transfer Complex Biophysical Journal. 116: 504a |
| Wang Q, Rio DC. (2018) JUM is a computational method for comprehensive annotation-free analysis of alternative pre-mRNA splicing patterns. Proceedings of the National Academy of Sciences of the United States of America |
| Lee YJ, Wang Q, Rio DC. (2018) Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5. Genes & Development |
| Wang Q, Abruzzi KC, Rosbash M, et al. (2018) Striking circadian neuron diversity and cycling of alternative splicing. Elife. 7 |
| Teixeira FK, Okuniewska M, Malone CD, et al. (2017) piRNA-mediated regulation of transposon alternative splicing in the soma and germ line. Nature. 552: 268-272 |
| Francis MJ, Roche S, Cho MJ, et al. (2016) Drosophila IRBP bZIP heterodimer binds P-element DNA and affects hybrid dysgenesis. Proceedings of the National Academy of Sciences of the United States of America |