Lennart Nilsson, Ph.D.

Affiliations: 
Biosciences and Nutrition Karolinska Institute, Stockholm, Sweden 
Area:
Computational chemistry, biophysics, nucleic acids, proteins
Website:
http://www.csb.ki.se/md/md.html
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"Lennart Nilsson"
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Publications

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Krmpot AJ, Nikolić SN, Oasa S, et al. (2019) Functional Fluorescence Microscopy Imaging (fFMI). Quantitative Scanning-Free Confocal Fluorescence Microscopy for the Characterization of Fast Dynamic Processes in Live Cells. Analytical Chemistry
Xu Y, Gissberg O, Pabon-Martinez YV, et al. (2019) The ability of locked nucleic acid oligonucleotides to pre-structure the double helix: A molecular simulation and binding study. Plos One. 14: e0211651
Morgunova E, Yin Y, Das PK, et al. (2018) Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife. 7
Hartono YD, Xu Y, Karshikoff A, et al. (2018) Modeling pK Shift in DNA Triplexes Containing Locked Nucleic Acids. Journal of Chemical Information and Modeling
Pabon-Martinez YV, Xu Y, Villa A, et al. (2017) LNA effects on DNA binding and conformation: from single strand to duplex and triplex structures. Scientific Reports. 7: 11043
Xu Y, Villa A, Nilsson L. (2017) The free energy of locking a ring: Changing a deoxyribonucleoside to a locked nucleic acid. Journal of Computational Chemistry
Xu Y, MacKerell AD, Nilsson L. (2016) Structural effects of modified ribonucleotides and magnesium in transfer RNAs. Bioorganic & Medicinal Chemistry
Deb I, Sarzynska J, Nilsson L, et al. (2014) Rapid communication capturing the destabilizing effect of dihydrouridine through molecular simulations. Biopolymers. 101: 985-91
Deb I, Sarzynska J, Nilsson L, et al. (2014) Conformational preferences of modified uridines: comparison of AMBER derived force fields. Journal of Chemical Information and Modeling. 54: 1129-42
Karshikoff A, Nilsson L, Foloppe N. (2013) Understanding the -C-X1-X2-C- motif in the active site of the thioredoxin superfamily: E. coli DsbA and its mutants as a model system. Biochemistry. 52: 5730-45
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