José Nelson Onuchic

1990-2011 Physics University of California, San Diego, La Jolla, CA 
 2011- Physics Rice University, Houston, TX 
Theoretical Biological Physics
"José Nelson Onuchic"
DOI: 10.1073/pnas.1007425107
Onuchic, Jose Nelson New aspects of the theory of electron transfer reaction dynamics. Dissertation (Ph.D.), California Institute of Technology (1987).

Mean distance: 11.56
Cross-listing: Physics Tree


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John J. Hopfield grad student 1987 Caltech (Neurotree)
 (New aspects of the theory of electron transfer reaction dynamics)


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Peter Leopold grad student UCSD
Zhipeng Wang grad student (Computational Biology Tree)
Kareem M Mehrabiani grad student 2015- Rice University (Physics Tree)
Weiqi Lu grad student 2017- Rice University (Computational Biology Tree)
Vitor Barbanti Pereira Leite grad student 1989-1995 UCSD (Physics Tree)
Marcos R Betancourt grad student 1992-1995 Rice University (Physics Tree)
Hugh Nymeyer grad student 2001 UCSD (Physics Tree)
Tongye Shen grad student 2002 UCSD (Physics Tree)
Margaret Shun Cheung grad student 2003 UCSD (Physics Tree)
Leslie Lou Chavez grad student 2005 UCSD (Physics Tree)
Sichun Yang grad student 2006 UCSD
Paul Charles Whitford grad student 2009 UCSD (Physics Tree)
Jeffrey Kenneth Noel grad student 2012 UCSD (Physics Tree)
Xingcheng Lin grad student 2012-2018 Rice University (Physics Tree)
Joan-Emma Shea post-doc 1997-2000 Scripps Research Institute
Changbong Hyeon post-doc 2006-2007 UCSD
Biman Jana post-doc 2011-2013 Rice University
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Staquicini DI, Tang FHF, Markosian C, et al. (2021) Design and proof-of-concept for targeted phage-based COVID-19 vaccination strategies with a streamlined cold-free supply chain. Biorxiv : the Preprint Server For Biology
Dutta M, Gilbert SP, Onuchic JN, et al. (2021) Mechanistic basis of propofol-induced disruption of kinesin processivity. Proceedings of the National Academy of Sciences of the United States of America. 118
Kohar V, Gordin D, Katebi A, et al. (2020) Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. Bioinformatics (Oxford, England)
Oliveira Junior AB, Contessoto VG, Mello MF, et al. (2020) A Scalable Computational Approach for Simulating Complexes of Multiple Chromosomes. Journal of Molecular Biology
Cheng RR, Contessoto V, Lieberman-Aiden E, et al. (2020) Exploring chromosomal structural heterogeneity across multiple cell lines. Elife. 9
Contessoto VG, Cheng RR, Hajitaheri A, et al. (2020) The Nucleome Data Bank: web-based resources to simulate and analyze the three-dimensional genome. Nucleic Acids Research
Jia D, Paudel BB, Hayford CE, et al. (2020) Drug-Tolerant Idling Melanoma Cells Exhibit Theory-Predicted Metabolic Low-Low Phenotype. Frontiers in Oncology. 10: 1426
Guo WH, Qi X, Yu X, et al. (2020) Enhancing intracellular accumulation and target engagement of PROTACs with reversible covalent chemistry. Nature Communications. 11: 4268
Huang B, Lu M, Galbraith M, et al. (2020) Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by random circuit perturbation. Journal of the Royal Society, Interface. 17: 20200500
Jin S, Chen M, Chen X, et al. (2020) Protein Structure Prediction in CASP13 using AWSEM-Suite. Journal of Chemical Theory and Computation
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