G. Andres Cisneros, Ph.D.

2009-2016 Chemistry Wayne State University, Detroit, MI, United States 
 2016- Chemistry University of North Texas, Denton, TX, United States 
Theoretical Chemistry, Computational Chemistry
"G. Andres Cisneros"

B.Sc.: UNAM, Advisor: Miguel Castro Martinez

Ph.D.: Duke University, Advisor Weitao Yang

Postdoc: NIEHS, Advisor: Thomas A. Darden (http://www.genealogy.math.ndsu.nodak.edu/id.php?id=34632)

Mean distance: 9.43
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Leddin EM, Cisneros GA. (2019) Comparison of DNA and RNA substrate effects on TET2 structure. Advances in Protein Chemistry. 117: 91-112
Duke RE, Cisneros GA. (2019) Ewald-based methods for Gaussian integral evaluation: application to a new parameterization of GEM. Journal of Molecular Modeling. 25: 307
Torabifard H, Cisneros GA. (2018) Insight into wild-type and T1372E TET2-mediated 5hmC oxidation using QM/MM calculations. Chemical Science. 9: 8433-8445
DeNizio JE, Liu MY, Leddin E, et al. (2018) Selectivity and Promiscuity in TET-mediated oxidation of 5-methylcytosine in DNA and RNA. Biochemistry
Silvestrov P, Maier SJ, Fang M, et al. (2018) DNArCdb: A database of cancer biomarkers in DNA repair genes that includes variants related to multiple cancer phenotypes. Dna Repair. 70: 10-17
Gokcan H, Kratz EG, Darden TA, et al. (2018) QM/MM Simulations with the Gaussian Electrostatic Model, A Density-Based Polarizable Potential. The Journal of Physical Chemistry Letters
Lagardère L, Jolly LH, Lipparini F, et al. (2018) Tinker-HP: a massively parallel molecular dynamics package for multiscale simulations of large complex systems with advanced point dipole polarizable force fields. Chemical Science. 9: 956-972
Silvestrov P, Cisneros GA. (2018) Insights into conformational changes in AlkD bound to DNA with a yatakemycin adduct from computational simulations. Theoretical Chemistry Accounts. 137: 78
Torabifard H, Reed L, Berry MT, et al. (2017) Computational and experimental characterization of a pyrrolidinium-based ionic liquid for electrolyte applications. The Journal of Chemical Physics. 147: 161731
Torabifard H, Cisneros GA. (2017) Computational investigation of O2 diffusion through an intra-molecular tunnel in AlkB; influence of polarization on O2 transport. Chemical Science. 8: 6230-6238
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