John B. Hogenesch, PhD

Affiliations: 
Pharmacology Cincinnati Children's Hospital and Medical Center, USA 
Area:
genomics, computational biology, drug discovery, circadian rhythms
Website:
hogeneschlab.org
Google:
"John Hogenesch"
Mean distance: 16.73 (cluster 32)
 
Cross-listing: Neurotree

Parents

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Christopher Alan Bradfield grad student 1992-1999 UW Madison (Neurotree)
Steve A. Kay post-doc 1999-2000 Scripps Institute (Plant Biology Tree)
Peter G. Schultz post-doc 1999-2000 Genomics Institute of the Novartis Research Foundation

Children

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Andrew I. Su grad student 1999-2004 Genomics Institute of the Novartis Research Foundation
Anthony O. Olarerin-George grad student 2007-2013 University of Pennsylvania Perelman School of Medicine (Neurotree)
Lauren J. Francey grad student 2011-2014 University of Pennsylvania Perelman School of Medicine
Nicholas F. Lahens grad student 2011-2014 University of Pennsylvania Perelman School of Medicine (Neurotree)
Ray Zhang grad student 2011-2014 University of Pennsylvania Perelman School of Medicine
Heather Ballance grad student 2011-2015 University of Pennsylvania Perelman School of Medicine
Gang Wu post-doc 2013- Cincinnati Children's Hospital and Medical Center
Ines Hoffmann post-doc 1999-2000 Genomics Institute of the Novartis Research Foundation
Anthony Orth post-doc 1999-2002 Genomics Institute of the Novartis Research Foundation
Satchin Panda post-doc 2000-2004 Genomics Institute of the Novartis Research Foundation
Trey K. Sato post-doc 2001-2005 University of Pennsylvania Perelman School of Medicine
Kevin R. Hayes post-doc 2005-2007 University of Pennsylvania Perelman School of Medicine (Neurotree)
Julie E. Baggs post-doc 2004-2009 University of Pennsylvania Perelman School of Medicine (Neurotree)
Michael Evan Hughes post-doc 2007-2009 University of Pennsylvania Perelman School of Medicine
Jason P. DeBruyne post-doc 2008-2011 University of Pennsylvania Perelman School of Medicine (Neurotree)
Anand Venkataraman post-doc 2010-2013 University of Pennsylvania Perelman School of Medicine
Ron Anafi post-doc 2011-2015 University of Pennsylvania Perelman School of Medicine
Yool Lee post-doc 2011-2016 University of Pennsylvania Perelman School of Medicine
David Smith post-doc 2014-2017 Cincinnati Children's Hospital and Medical Center
BETA: Related publications

Publications

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Lee YY, Cal-Kayitmazbatir S, Francey LJ, et al. (2022) is a null mutation of Cryptochrome 1 in Syrian hamsters. Proceedings of the National Academy of Sciences of the United States of America. 119: e2123560119
Zhang T, Du X, Gu Y, et al. (2022) Analysis of Diurnal Variations in Heart Rate: Potential Applications for Chronobiology and Cardiovascular Medicine. Frontiers in Physiology. 13: 835198
Shen Y, Endale M, Wang W, et al. (2021) NF-κB modifies the mammalian circadian clock through interaction with the core clock protein BMAL1. Plos Genetics. 17: e1009933
Wu G, Francey LJ, Ruben MD, et al. (2021) Normalized coefficient of variation (nCV): a method to evaluate circadian clock robustness in population scale data. Bioinformatics (Oxford, England)
Rosselot AE, Park M, Kim M, et al. (2021) Ontogeny and function of the circadian clock in intestinal organoids. The Embo Journal. e106973
Lahens NF, Brooks TG, Sarantopoulou D, et al. (2021) CAMPAREE: a robust and configurable RNA expression simulator. Bmc Genomics. 22: 692
Stokes K, Nunes M, Trombley C, et al. (2021) The circadian clock gene, Bmal1, regulates intestinal stem cell signaling and represses tumor initiation. Cellular and Molecular Gastroenterology and Hepatology
Wu G, Lee YY, Gulla EM, et al. (2021) Short-term exposure to intermittent hypoxia leads to changes in gene expression seen in chronic pulmonary disease. Elife. 10
Wu G, Ruben MD, Francey LJ, et al. (2020) A population-based gene expression signature of molecular clock phase from a single epidermal sample. Genome Medicine. 12: 73
Cal-Kayitmazbatir S, Kulkoyluoglu-Cotul E, Growe J, et al. (2020) CRY1-CBS binding regulates circadian clock function and metabolism. The Febs Journal
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