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Ulf Ryde, Ph.D.

Affiliations: 
Chemistry Lund University, Lund, Skåne län, Sweden 
Area:
Theoretical Chemistry
Website:
http://www.teokem.lu.se/~ulf/
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"Ulf Ryde"
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Publications

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Wallerstein J, Ekberg V, Ignjatović MM, et al. (2021) Entropy-Entropy Compensation between the Protein, Ligand, and Solvent Degrees of Freedom Fine-Tunes Affinity in Ligand Binding to Galectin-3C. Jacs Au. 1: 484-500
Bergmann J, Oksanen E, Ryde U. (2021) Combining crystallography with quantum mechanics. Current Opinion in Structural Biology. 72: 18-26
Caldararu O, Ekberg V, Logan DT, et al. (2021) Exploring ligand dynamics in protein crystal structures with ensemble refinement. Acta Crystallographica. Section D, Structural Biology. 77: 1099-1115
Kelpšas V, Caldararu O, Blakeley MP, et al. (2021) Neutron structures of triosephosphate isomerase in complex with reaction-intermediate mimics shed light on the proton-shuttling steps. Iucrj. 8: 633-643
Kelpšas V, Caldararu O, Blakeley MP, et al. (2021) Neutron structures of triosephosphate isomerase in complex with reaction-intermediate mimics shed light on the proton-shuttling steps. Iucrj. 8: 633-643
Ekberg V, Ryde U. (2021) On the Use of Interaction Entropy and Related Methods to Estimate Binding Entropies. Journal of Chemical Theory and Computation
Ekberg V, Ryde U. (2021) On the Use of Interaction Entropy and Related Methods to Estimate Binding Entropies. Journal of Chemical Theory and Computation
Bergmann J, Oksanen E, Ryde U. (2021) Quantum-refinement studies of the bidentate ligand of V‑nitrogenase and the protonation state of CO-inhibited Mo‑nitrogenase. Journal of Inorganic Biochemistry. 219: 111426
Bergmann J, Oksanen E, Ryde U. (2021) Critical evaluation of a crystal structure of nitrogenase with bound N ligands. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry
Jafari S, Ryde U, Irani M. (2021) QM/MM Study of the Catalytic Reaction of Myrosinase; Importance of Assigning Proper Protonation States of Active-Site Residues. Journal of Chemical Theory and Computation
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