Hiroaki Kitano
Affiliations: | Systems Biology Institute |
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Parents
Sign in to add mentor| Masaru Tomita | research scientist | 1988-1991 | Carnegie Mellon (Computational Biology Tree) |
Children
Sign in to add trainee| Kaito Kikuchi | research assistant | 2013-2016 | Systems Biology Institute |
| Archana Bajpai | post-doc | (Computational Biology Tree) |
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Publications
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| Keating SM, Waltemath D, König M, et al. (2020) SBML Level 3: an extensible format for the exchange and reuse of biological models. Molecular Systems Biology. 16: e9110 |
| Nock R, Polouliakh N, Nielsen F, et al. (2020) A Geometric Clustering Tool (AGCT) to robustly unravel the inner cluster structures of time-series gene expressions. Plos One. 15: e0233755 |
| Uchida S, Asai Y, Kariya Y, et al. (2019) Integrative and theoretical research on the architecture of a biological system and its disorder. The Journal of Physiological Sciences : Jps |
| Bajpai A, Ishii T, Miyauchi K, et al. (2017) Insights into gene expression profiles induced by Socs3 depletion in keratinocytes. Scientific Reports. 7: 15830 |
| Kawakami E, Nakaoka S, Ohta T, et al. (2016) Weighted enrichment method for prediction of transcription regulators from transcriptome and global chromatin immunoprecipitation data. Nucleic Acids Research. 44: 5010-21 |
| Nim HT, Furtado MB, Costa MW, et al. (2015) VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery. Bmc Bioinformatics. 16: 141 |
| Asai Y, Abe T, Oka H, et al. (2014) A Versatile Platform for Multilevel Modeling of Physiological Systems: SBML-PHML Hybrid Modeling and Simulation Advanced Biomedical Engineering. 3: 50-58 |
| Ghosh S, Matsuoka Y, Asai Y, et al. (2013) Toward an integrated software platform for systems pharmacology. Biopharmaceutics & Drug Disposition. 34: 508-26 |
| Schaefer MH, Lopes TJ, Mah N, et al. (2013) Adding protein context to the human protein-protein interaction network to reveal meaningful interactions. Plos Computational Biology. 9: e1002860 |
| Makanae K, Kintaka R, Makino T, et al. (2013) Identification of dosage-sensitive genes in Saccharomyces cerevisiae using the genetic tug-of-war method. Genome Research. 23: 300-11 |