Kai Zhang, Ph.D.

Affiliations: 
2012-2018 Bioinformatics and Systems Biology University of California, San Diego, La Jolla, CA 
Area:
Computational biology
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"Kai Zhang"
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Publications

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Raviram R, Raman A, Preissl S, et al. (2023) Integrated analysis of single-cell chromatin state and transcriptome identified common vulnerability despite glioblastoma heterogeneity. Proceedings of the National Academy of Sciences of the United States of America. 120: e2210991120
Chen PB, Fiaux PC, Zhang K, et al. (2022) Systematic discovery and functional dissection of enhancers needed for cancer cell fitness and proliferation. Cell Reports. 41: 111630
Zhang K, Hocker JD, Miller M, et al. (2021) A single-cell atlas of chromatin accessibility in the human genome. Cell
Li YE, Preissl S, Hou X, et al. (2021) An atlas of gene regulatory elements in adult mouse cerebrum. Nature. 598: 129-136
Hocker JD, Poirion OB, Zhu F, et al. (2021) Cardiac cell type-specific gene regulatory programs and disease risk association. Science Advances. 7
Fang R, Preissl S, Li Y, et al. (2021) Comprehensive analysis of single cell ATAC-seq data with SnapATAC. Nature Communications. 12: 1337
Ainsworth RI, Ai R, Ding B, et al. (2018) Bayesian Networks Predict Neuronal Transdifferentiation. G3 (Bethesda, Md.)
Milner JJ, Toma C, Yu B, et al. (2017) Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature. 552: 253-257
Yu B, Zhang K, Milner JJ, et al. (2017) Epigenetic landscapes reveal transcription factors that regulate CD8(+) T cell differentiation. Nature Immunology
Zhang K, Li N, Ainsworth RI, et al. (2016) Systematic identification of protein combinations mediating chromatin looping. Nature Communications. 7: 12249
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