Robert L. Jernigan
Affiliations: | Iowa State University, Ames, IA, United States |
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Children
Sign in to add traineeMyron Peto | grad student | 2007 | Iowa State |
Yaping Feng | grad student | 2008 | Iowa State |
Haitao Cheng | grad student | 2009 | Iowa State |
Feihong Wu | grad student | 2009 | Iowa State |
Sumudu P. Leelananda | grad student | 2011 | Iowa State |
Michael T. Zimmermann | grad student | 2011 | Iowa State |
Ataur R. Katebi | grad student | 2013 | Iowa State |
Usha K. Muppirala | grad student | 2013 | Iowa State |
Sayane Shome | grad student | 2016-2021 | Iowa State |
Taner Z. Sen | post-doc | Iowa State |
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Publications
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Kilinc M, Jia K, Jernigan RL. (2025) Major advances in protein function assignment by remote homolog detection with protein language models - A review. Current Opinion in Structural Biology. 90: 102984 |
Shome S, Jia K, Sivasankar S, et al. (2023) Characterizing Interactions in E-cadherin Assemblages. Biophysical Journal |
Kumar A, Kaynak BT, Dorman KS, et al. (2023) Predicting Allosteric Pockets in Protein Biological Assemblages. Bioinformatics (Oxford, England) |
Jia K, Kilinc M, Jernigan RL. (2023) Functional Protein Dynamics Directly from Sequences. The Journal of Physical Chemistry. B. 127: 1914-1921 |
Kilinc M, Jia K, Jernigan RL. (2023) Improved global protein homolog detection with major gains in function identification. Proceedings of the National Academy of Sciences of the United States of America. 120: e2211823120 |
Khade PM, Jernigan RL. (2022) Entropies Derived from the Packing Geometries within a Single Protein Structure. Acs Omega. 7: 20719-20730 |
Jernigan RL, Khade P, Kumar A, et al. (2022) Using Surface Hydrophobicity Together with Empirical Potentials to Identify Protein-Protein Binding Sites: Application to the Interactions of E-cadherins. Methods in Molecular Biology (Clifton, N.J.). 2340: 41-50 |
Shome S, Sankar K, Jernigan RL. (2021) Simulated Drug Efflux for the AbgT Family of Membrane Transporters. Journal of Chemical Information and Modeling. 61: 5673-5681 |
Khade PM, Scaramozzino D, Kumar A, et al. (2021) hdANM: a new comprehensive dynamics model for protein hinges. Biophysical Journal |
Ehrlich JJ, Weerts RM, Shome S, et al. (2021) Xyloglucan Xylosyltransferase 1 Displays Promiscuity Toward Donor Substrates During In vitro Reactions. Plant & Cell Physiology |