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Jun Zhang

Affiliations: 
2012-2017 College of Chemistry and Molecular Engineering Peking University, Beijing, Beijing Shi, China 
 2017- Department of Mathematics and Computer Science Freie Universität Berlin, Berlin, Germany 
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Yi Qin Gao grad student 2012-2017 Peking University
Frank Noé post-doc 2017- FU Berlin

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Publications

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Yuan S, Han X, Zhang J, et al. (2024) Generating High-Precision Force Fields for Molecular Dynamics Simulations to Study Chemical Reaction Mechanisms Using Molecular Configuration Transformer. The Journal of Physical Chemistry. A
Zhang J, Liu S, Chen M, et al. (2023) Unsupervisedly Prompting AlphaFold2 for Accurate Few-Shot Protein Structure Prediction. Journal of Chemical Theory and Computation
Huang Y, Zhang H, Jiang S, et al. (2023) DSDP: A Blind Docking Strategy Accelerated by GPUs. Journal of Chemical Information and Modeling
Zhang J, Chen D, Xia Y, et al. (2023) Artificial Intelligence Enhanced Molecular Simulations. Journal of Chemical Theory and Computation
Wang J, Xue Y, He Y, et al. (2023) Characterization of network hierarchy reflects cell state specificity in genome organization. Genome Research. 33: 247-260
Lei YK, Zhang Z, Han X, et al. (2022) Locating Transition Zone in Phase Space. Journal of Chemical Theory and Computation
Li M, Zhang J, Niu H, et al. (2022) Phase Transition between Crystalline Variants of Ordinary Ice. The Journal of Physical Chemistry Letters. 13: 8601-8606
Han X, Zhang J, Yang YI, et al. (2022) Enhanced Sampling Simulation Reveals How Solvent Influences Chirogenesis of the Intra-Molecular Diels-Alder Reaction. Journal of Chemical Theory and Computation
Liu M, Zhang J, Zhu C, et al. (2021) DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes. Nature Communications. 12: 4108
Zhang J, Lei YK, Zhang Z, et al. (2021) Deep reinforcement learning of transition states. Physical Chemistry Chemical Physics : Pccp
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