Thomas Simonson

École Polytechnique Paris 
"Thomas Simonson"
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Chen X, Ferchaud N, Briozzo P, et al. (2023) PLP-Dependent Enzyme Methionine γ-Lyase: Insights into the Michaelis Complex from Molecular Dynamics and Free Energy Simulations. Biochemistry
Chen X, Briozzo P, Machover D, et al. (2022) A Computational Model for the PLP-Dependent Enzyme Methionine -Lyase. Frontiers in Molecular Biosciences. 9: 886358
Opuu V, Mignon D, Simonson T. (2022) Knowledge-Based Unfolded State Model for Protein Design. Methods in Molecular Biology (Clifton, N.J.). 2405: 403-424
Michael E, Simonson T. (2021) How much can physics do for protein design? Current Opinion in Structural Biology. 72: 46-54
Panel N, Villa F, Opuu V, et al. (2021) Computational Design of PDZ-Peptide Binding. Methods in Molecular Biology (Clifton, N.J.). 2256: 237-255
Mignon D, Druart K, Michael E, et al. (2020) Physics-Based Computational Protein Design: An Update. The Journal of Physical Chemistry. A
Mazurek AH, Szeleszczuk Ł, Simonson T, et al. (2020) Application of Various Molecular Modelling Methods in the Study of Estrogens and Xenoestrogens. International Journal of Molecular Sciences. 21
Michael E, Polydorides S, Simonson T, et al. (2020) Hybrid MC/MD for protein design. The Journal of Chemical Physics. 153: 054113
Opuu V, Sun YJ, Hou T, et al. (2020) A physics-based energy function allows the computational redesign of a PDZ domain. Scientific Reports. 10: 11150
Opuu V, Nigro G, Gaillard T, et al. (2020) Adaptive landscape flattening allows the design of both enzyme: Substrate binding and catalytic power. Plos Computational Biology. 16: e1007600
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