Daniel Almonacid

Affiliations: 
2004-2007 Chemistry University of Cambridge, Cambridge, England, United Kingdom 
 2007-2012 Bioengineering and Therapeutic Sciences University of California, San Francisco, San Francisco, CA 
 2012- Ciencias Biológicas Universidad Andrés Bello, Santiago, Región Metropolitana, Chile 
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"Daniel Almonacid"
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Rubat S, Varas I, Sepúlveda R, et al. (2017) Increasing the intracellular isoprenoid pool in Saccharomyces cerevisiae by structural fine-tuning of a bifunctional farnesyl diphosphate synthase. Fems Yeast Research. 17
Akiva E, Brown S, Almonacid DE, et al. (2014) The Structure-Function Linkage Database. Nucleic Acids Research. 42: D521-30
Wallrapp FH, Pan JJ, Ramamoorthy G, et al. (2013) Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proceedings of the National Academy of Sciences of the United States of America. 110: E1196-202
Holliday GL, Andreini C, Fischer JD, et al. (2012) MACiE: exploring the diversity of biochemical reactions. Nucleic Acids Research. 40: D783-9
Almonacid DE, Babbitt PC. (2011) Toward mechanistic classification of enzyme functions. Current Opinion in Chemical Biology. 15: 435-42
Almonacid DE, Yera ER, Mitchell JB, et al. (2010) Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme function. Plos Computational Biology. 6: e1000700
Holliday GL, Almonacid DE, Mitchell JB, et al. (2007) The chemistry of protein catalysis. Journal of Molecular Biology. 372: 1261-77
O'Boyle NM, Holliday GL, Almonacid DE, et al. (2007) Using reaction mechanism to measure enzyme similarity. Journal of Molecular Biology. 368: 1484-99
Holliday GL, Almonacid DE, Bartlett GJ, et al. (2007) MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms. Nucleic Acids Research. 35: D515-20
Holliday GL, Bartlett GJ, Almonacid DE, et al. (2005) MACiE: a database of enzyme reaction mechanisms. Bioinformatics (Oxford, England). 21: 4315-6
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