Birgit Strodel
Affiliations: | Research Centre Juelich, Germany, Jülich, Nordrhein-Westfalen, Germany | ||
Heinrich Heine University Düsseldorf, Düsseldorf, Nordrhein-Westfalen, Germany |
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Parents
Sign in to add mentorGerhard Stock | grad student | Goethe-Universität Frankfurt | |
David J. Wales | post-doc | Cambridge |
Children
Sign in to add traineeSuman Samantray | grad student | 2018-2021 | RWTH Aachen; Research Centre Juelich |
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Publications
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Khemtemourian L, Fatafta H, Davion B, et al. (2022) Structural Dissection of the First Events Following Membrane Binding of the Islet Amyloid Polypeptide. Frontiers in Molecular Biosciences. 9: 849979 |
Samantray S, Schumann W, Illig AM, et al. (2022) Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks. Methods in Molecular Biology (Clifton, N.J.). 2340: 235-279 |
Samantray S, Olubiyi OO, Strodel B. (2021) The Influences of Sulphation, Salt Type, and Salt Concentration on the Structural Heterogeneity of Glycosaminoglycans. International Journal of Molecular Sciences. 22 |
Fatafta H, Samantray S, Sayyed-Ahmad A, et al. (2021) Molecular simulations of IDPs: From ensemble generation to IDP interactions leading to disorder-to-order transitions. Progress in Molecular Biology and Translational Science. 183: 135-185 |
Fatafta H, Khaled M, Owen MC, et al. (2021) Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane. Proceedings of the National Academy of Sciences of the United States of America. 118 |
Willbold D, Strodel B, Schröder GF, et al. (2021) Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids. Chemical Reviews. 121: 8285-8307 |
Paul A, Samantray S, Anteghini M, et al. (2021) Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment. Chemical Science. 12: 6652-6669 |
Samantray S, Strodel B. (2021) The Effects of Different Glycosaminoglycans on the Structure and Aggregation of the Amyloid-β (16-22) Peptide. The Journal of Physical Chemistry. B. 125: 5511-5525 |
Samantray S, Yin F, Kav B, et al. (2020) Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations. Journal of Chemical Information and Modeling |
Deike S, Rothemund S, Voigt B, et al. (2020) β-Turn mimetic synthetic peptides as amyloid-β aggregation inhibitors. Bioorganic Chemistry. 101: 104012 |