Jagannath Mondal, Ph.D
Affiliations: | TIFR Centre for Interdisciplinary Sciences |
Area:
Computer simulationsGoogle:
"Jagannath Mondal"Mean distance: 8.89 | S | N | B | C | P |
Parents
Sign in to add mentor| Arun Yethiraj | grad student | 2006-2011 | UW Madison | |
| (Multiscale computer simulation study of amphiphilic macromolecules.) | ||||
| Bruce J. Berne | post-doc | 2011-2015 | Columbia | |
Children
Sign in to add trainee| Mrinmoy Mukherjee | grad student | 2014-2019 | Tata Institute of Fundamental Research Hyderabad |
| Bibhab Bandhu Majumdar | post-doc | 2020-2022 | TIFR Centre for Interdisciplinary Sciences |
BETA: Related publications
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Publications
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| Dandekar BR, Majumdar BB, Mondal J. (2023) Nonmonotonic Modulation of the Protein-Ligand Recognition Event by Inert Crowders. The Journal of Physical Chemistry. B. 127: 7449-7461 |
| Ahalawat N, Sahil M, Mondal J. (2023) Resolving Protein Conformational Plasticity and Substrate Binding via Machine Learning. Journal of Chemical Theory and Computation |
| Majumdar BB, Mondal J. (2022) Impact of Inert Crowders on Host-Guest Recognition Process. The Journal of Physical Chemistry. B |
| Bandyopadhyay S, Majumdar BB, Mondal J. (2022) Solvent's Role in Cavity-Ligand Recognition Would Depend on the Mode of Ligand Diffusion. The Journal of Physical Chemistry. B |
| Koneru JK, Sinha S, Mondal J. (2021) Molecular Dynamics Simulations Elucidate Oligosaccharide Recognition Pathways by Galectin-3 at Atomic Resolution. The Journal of Biological Chemistry. 101271 |
| Mukherjee M, Mondal J. (2020) Bottom-Up View of the Mechanism of Action of Protein-Stabilizing Osmolytes. The Journal of Physical Chemistry. B |
| Mukherjee M, Mondal J. (2020) Unifying the Contrasting Mechanisms of Protein-Stabilising Osmolytes. The Journal of Physical Chemistry. B |
| Dandekar BR, Mondal J. (2020) Capturing Protein-Ligand Recognition Pathways in Coarse-Grained Simulation. The Journal of Physical Chemistry Letters |
| Sharma N, Ahalawat N, Sandhu P, et al. (2020) Role of allosteric switches and adaptor domains in long-distance cross-talk and transient tunnel formation. Science Advances. 6: eaay7919 |
| Prakashchand DD, Ahalawat N, Bandyopadhyay S, et al. (2020) Non-affine displacements encode collective conformational fluctuations in proteins. Journal of Chemical Theory and Computation |