Arnaud Blondel, PhD

Institut Pasteur, Paris, Paris, France 
Structural bioinformatics
"Arnaud Blondel"
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Hugues Bedouelle grad student 1988-1992 Institut Pasteur
 (Supervision of a Ph.D. thesis)
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Varela-Chavez C, Blondel A, Popoff MR. (2020) Bacterial intracellularly active toxins: membrane localization of the active domain. Cellular Microbiology. e13213
Monet D, Desdouits N, Nilges M, et al. (2019) mkgridXf: consistent identification of plausible binding sites despite the elusive nature of cavities and grooves in protein dynamics. Journal of Chemical Information and Modeling
Amaral PA, Autheman D, de Melo GD, et al. (2018) Designed mono- and di-covalent inhibitors trap modeled functional motions for Trypanosoma cruzi proline racemase in crystallography. Plos Neglected Tropical Diseases. 12: e0006853
Abdelkrim YZ, Harigua-Souiai E, Barhoumi M, et al. (2018) The steroid derivative 6-aminocholestanol inhibits the DEAD-box helicase eIF4A (LieIF4A) from the Trypanosomatid parasite Leishmania by perturbing the RNA and ATP binding sites. Molecular and Biochemical Parasitology. 226: 9-19
Harigua-Souiai E, Abdelkrim YZ, Bassoumi-Jamoussi I, et al. (2018) Identification of novel leishmanicidal molecules by virtual and biochemical screenings targeting Leishmania eukaryotic initiation factor 4A. Plos Neglected Tropical Diseases. 12: e0006160
Varela Chavez C, Haustant GM, Baron B, et al. (2016) The Tip of the Four N-Terminal α-Helices of Clostridium sordellii Lethal Toxin Contains the Interaction Site with Membrane Phosphatidylserine Facilitating Small GTPases Glucosylation. Toxins. 8
Harigua-Souiai E, Cortes-Ciriano I, Desdouits N, et al. (2015) Identification of binding sites and favorable ligand binding moieties by virtual screening and self-organizing map analysis. Bmc Bioinformatics. 16: 93
Varela Chavez C, Hoos S, Haustant GM, et al. (2015) The catalytic domains of Clostridium sordellii lethal toxin and related large clostridial glucosylating toxins specifically recognize the negatively charged phospholipids phosphatidylserine and phosphatidic acid. Cellular Microbiology
Desdouits N, Nilges M, Blondel A. (2015) Principal Component Analysis reveals correlation of cavities evolution and functional motions in proteins. Journal of Molecular Graphics & Modelling. 55: 13-24
Costa MG, Benetti-Barbosa TG, Desdouits N, et al. (2014) Impact of M36I polymorphism on the interaction of HIV-1 protease with its substrates: insights from molecular dynamics. Bmc Genomics. 15: S5
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