James C. Gumbart, Ph.D.
Affiliations: | 2013- | Physics | Georgia Institute of Technology, Atlanta, GA |
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"James Gumbart"Mean distance: 8.86 | S | N | B | C | P |
Parents
Sign in to add mentor| Klaus Schulten | grad student | 2005-2009 | UIUC |
| Benoit Roux | post-doc | 2011-2013 | Chicago |
Children
Sign in to add trainee| Atanu Acharya | post-doc | 2019-2022 | Georgia Tech |
| Byeongjae Chun | research scientist |
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Publications
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| Pang YT, Acharya A, Lynch DL, et al. (2022) SARS-CoV-2 spike opening dynamics and energetics reveal the individual roles of glycans and their collective impact. Communications Biology. 5: 1170 |
| Allsopp R, Pavlova A, Cline T, et al. (2022) Antimicrobial Peptide Mechanism Studied by Scattering-Guided Molecular Dynamics Simulation. The Journal of Physical Chemistry. B |
| Hermansen S, Ryoo D, Orwick-Rydmark M, et al. (2022) The Role of Extracellular Loops in the Folding of Outer Membrane Protein X (OmpX) of . Frontiers in Molecular Biosciences. 9: 918480 |
| Stevens CM, Babii SO, Pandya AN, et al. (2022) Proton transfer activity of the reconstituted MmpL3 is modulated by substrate mimics and inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 119: e2113963119 |
| Yu B, Roy Choudhury M, Yang X, et al. (2022) Restoring and Enhancing the Potency of Existing Antibiotics against Drug-Resistant Gram-Negative Bacteria through the Development of Potent Small-Molecule Adjuvants. Acs Infectious Diseases |
| Fu H, Chen H, Blazhynska M, et al. (2022) Accurate determination of protein:ligand standard binding free energies from molecular dynamics simulations. Nature Protocols |
| Acharya A, Yi D, Pavlova A, et al. (2022) Resolving the Hydride Transfer Pathway in Oxidative Conversion of Proline to Pyrrole. Biochemistry |
| Akey CW, Singh D, Ouch C, et al. (2021) Comprehensive structure and functional adaptations of the yeast nuclear pore complex. Cell |
| Wu R, Bakelar JW, Lundquist K, et al. (2021) Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM. Nature Communications. 12: 7131 |
| Gumbart JC, Ferreira JL, Hwang H, et al. (2021) Lpp positions peptidoglycan at the AcrA-TolC interface in the AcrAB-TolC multidrug efflux pump. Biophysical Journal |