James C. Gumbart, Ph.D.

Affiliations: 
2013- Physics Georgia Institute of Technology, Atlanta, GA 
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"James Gumbart"
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Parents

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Klaus Schulten grad student 2005-2009 UIUC
Benoit Roux post-doc 2011-2013 Chicago

Children

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Atanu Acharya post-doc 2019-2022 Georgia Tech
Byeongjae Chun research scientist
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Publications

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Wu K, Itskanov S, Lynch DL, et al. (2024) Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10. Nature Communications. 15: 2182
Wu K, Itskanov S, Lynch DL, et al. (2024) Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10. Biorxiv : the Preprint Server For Biology
Blazhynska M, Gumbart JC, Chen H, et al. (2023) A Rigorous Framework for Calculating Protein-Protein Binding Affinities in Membranes. Journal of Chemical Theory and Computation. 19: 9077-9092
Lui VG, Hoenig M, Cabrera-Martinez B, et al. (2023) A partial human LCK defect causes a T cell immunodeficiency with intestinal inflammation. The Journal of Experimental Medicine. 221
Sim SI, Chen Y, Lynch DL, et al. (2023) Structural basis of mitochondrial protein import by the TIM23 complex. Nature
Li Y, Acharya A, Yang L, et al. (2023) Insights into substrate transport and water permeation in the mycobacterial transporter MmpL3. Biophysical Journal
Pang YT, Acharya A, Lynch DL, et al. (2022) SARS-CoV-2 spike opening dynamics and energetics reveal the individual roles of glycans and their collective impact. Communications Biology. 5: 1170
Allsopp R, Pavlova A, Cline T, et al. (2022) Antimicrobial Peptide Mechanism Studied by Scattering-Guided Molecular Dynamics Simulation. The Journal of Physical Chemistry. B
Hermansen S, Ryoo D, Orwick-Rydmark M, et al. (2022) The Role of Extracellular Loops in the Folding of Outer Membrane Protein X (OmpX) of . Frontiers in Molecular Biosciences. 9: 918480
Stevens CM, Babii SO, Pandya AN, et al. (2022) Proton transfer activity of the reconstituted MmpL3 is modulated by substrate mimics and inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 119: e2113963119
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