James C. Gumbart, Ph.D.
Affiliations: | 2013- | Physics | Georgia Institute of Technology, Atlanta, GA |
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"James Gumbart"Mean distance: 8.86 | S | N | B | C | P |
Parents
Sign in to add mentor| Klaus Schulten | grad student | 2005-2009 | UIUC |
| Benoit Roux | post-doc | 2011-2013 | Chicago |
Children
Sign in to add trainee| Atanu Acharya | post-doc | 2019-2022 | Georgia Tech |
| Byeongjae Chun | research scientist |
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Publications
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| Wu K, Itskanov S, Lynch DL, et al. (2024) Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10. Biorxiv : the Preprint Server For Biology |
| Blazhynska M, Gumbart JC, Chen H, et al. (2023) A Rigorous Framework for Calculating Protein-Protein Binding Affinities in Membranes. Journal of Chemical Theory and Computation. 19: 9077-9092 |
| Lui VG, Hoenig M, Cabrera-Martinez B, et al. (2023) A partial human LCK defect causes a T cell immunodeficiency with intestinal inflammation. The Journal of Experimental Medicine. 221 |
| Sim SI, Chen Y, Lynch DL, et al. (2023) Structural basis of mitochondrial protein import by the TIM23 complex. Nature |
| Li Y, Acharya A, Yang L, et al. (2023) Insights into substrate transport and water permeation in the mycobacterial transporter MmpL3. Biophysical Journal |
| Pang YT, Acharya A, Lynch DL, et al. (2022) SARS-CoV-2 spike opening dynamics and energetics reveal the individual roles of glycans and their collective impact. Communications Biology. 5: 1170 |
| Allsopp R, Pavlova A, Cline T, et al. (2022) Antimicrobial Peptide Mechanism Studied by Scattering-Guided Molecular Dynamics Simulation. The Journal of Physical Chemistry. B |
| Hermansen S, Ryoo D, Orwick-Rydmark M, et al. (2022) The Role of Extracellular Loops in the Folding of Outer Membrane Protein X (OmpX) of . Frontiers in Molecular Biosciences. 9: 918480 |
| Stevens CM, Babii SO, Pandya AN, et al. (2022) Proton transfer activity of the reconstituted MmpL3 is modulated by substrate mimics and inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 119: e2113963119 |
| Yu B, Roy Choudhury M, Yang X, et al. (2022) Restoring and Enhancing the Potency of Existing Antibiotics against Drug-Resistant Gram-Negative Bacteria through the Development of Potent Small-Molecule Adjuvants. Acs Infectious Diseases |