Mark Bathe, Ph.D.

2009- Biological Engineering Massachusetts Institute of Technology, Cambridge, MA, United States 
"Mark Bathe"
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Nilah Monnier Ioannidis grad student 2009-2013 MIT
Xiao Wang post-doc
William P Bricker post-doc 2015-
James L. Banal post-doc 2016- MIT
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Guo SM, Veneziano R, Gordonov S, et al. (2019) Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes. Nature Communications. 10: 4377
Wamhoff EC, Banal JL, Bricker WP, et al. (2019) Programming Structured DNA Assemblies to Probe Biophysical Processes. Annual Review of Biophysics. 48: 395-419
Kulikov V, Guo SM, Stone M, et al. (2019) DoGNet: A deep architecture for synapse detection in multiplexed fluorescence images. Plos Computational Biology. 15: e1007012
Shepherd TR, Du RR, Huang H, et al. (2019) Bioproduction of pure, kilobase-scale single-stranded DNA. Scientific Reports. 9: 6121
Jun H, Zhang F, Shepherd T, et al. (2019) Autonomously designed free-form 2D DNA origami. Science Advances. 5: eaav0655
Jun H, Shepherd TR, Zhang K, et al. (2019) Automated Sequence Design of 3D Polyhedral Wireframe DNA Origami with Honeycomb Edges. Acs Nano
Bricker WP, Banal JL, Stone MB, et al. (2018) Molecular model of J-aggregated pseudoisocyanine fibers. The Journal of Chemical Physics. 149: 024905
Veneziano R, Shepherd TR, Ratanalert S, et al. (2018) In vitro synthesis of gene-length single-stranded DNA. Scientific Reports. 8: 6548
Boulais É, Sawaya NPD, Veneziano R, et al. (2017) Programmed coherent coupling in a synthetic DNA-based excitonic circuit. Nature Materials
Banal JL, Kondo T, Veneziano R, et al. (2017) Photophysics of J-Aggregate-Mediated Energy Transfer on DNA. The Journal of Physical Chemistry Letters. 5827-5833
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