Jennifer Lynn Seffernick - Publications

Affiliations: 
2001 University of Minnesota, Twin Cities, Minneapolis, MN 

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Shi K, Cho S, Aukema KG, Lee T, Bera AK, Seffernick JL, Wackett LP, Aihara H. Crystal structures of Moorella thermoacetica cyanuric acid hydrolase reveal conformational flexibility and asymmetry important for catalysis. Plos One. 14: e0216979. PMID 31181074 DOI: 10.1371/Journal.Pone.0216979  0.92
2016 Seffernick JL, Wackett LP. Ancient and Recent Evolution Converge for the Biodegradation of Cyanuric Acid and Related Triazines. Applied and Environmental Microbiology. PMID 26729715 DOI: 10.1128/Aem.03594-15  0.92
2015 Schürner HK, Seffernick JL, Grzybkowska A, Dybala-Defratyka A, Wackett LP, Elsner M. Characteristic isotope fractionation patterns in s-triazine degradation have their origin in multiple protonation options in the s-triazine hydrolase TrzN. Environmental Science & Technology. 49: 3490-8. PMID 25688667 DOI: 10.1021/Es5055385  0.92
2014 Cho S, Shi K, Seffernick JL, Dodge AG, Wackett LP, Aihara H. Cyanuric acid hydrolase from Azorhizobium caulinodans ORS 571: crystal structure and insights into a new class of Ser-Lys dyad proteins. Plos One. 9: e99349. PMID 24915109 DOI: 10.1371/Journal.Pone.0099349  0.92
2013 Summers RM, Seffernick JL, Quandt EM, Yu CL, Barrick JE, Subramanian MV. Caffeine junkie: an unprecedented glutathione S-transferase-dependent oxygenase required for caffeine degradation by Pseudomonas putida CBB5. Journal of Bacteriology. 195: 3933-9. PMID 23813729 DOI: 10.1128/Jb.00585-13  0.92
2012 Seffernick JL, Erickson JS, Cameron SM, Cho S, Dodge AG, Richman JE, Sadowsky MJ, Wackett LP. Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family. Journal of Bacteriology. 194: 4579-88. PMID 22730121 DOI: 10.1128/Jb.00791-12  0.92
2010 Seffernick JL, Reynolds E, Fedorov AA, Fedorov E, Almo SC, Sadowsky MJ, Wackett LP. X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN. The Journal of Biological Chemistry. 285: 30606-14. PMID 20659898 DOI: 10.1074/Jbc.M110.138677  0.92
2010 Sukovich DJ, Seffernick JL, Richman JE, Hunt KA, Gralnick JA, Wackett LP. Structure, function, and insights into the biosynthesis of a head-to-head hydrocarbon in Shewanella oneidensis strain MR-1. Applied and Environmental Microbiology. 76: 3842-9. PMID 20418444 DOI: 10.1128/Aem.00433-10  0.92
2010 Sukovich DJ, Seffernick JL, Richman JE, Gralnick JA, Wackett LP. Widespread head-to-head hydrocarbon biosynthesis in bacteria and role of OleA. Applied and Environmental Microbiology. 76: 3850-62. PMID 20418421 DOI: 10.1128/Aem.00436-10  0.92
2010 Seffernick JL, Dodge AG, Sadowsky MJ, Bumpus JA, Wackett LP. Bacterial ammeline metabolism via guanine deaminase. Journal of Bacteriology. 192: 1106-12. PMID 20023034 DOI: 10.1128/Jb.01243-09  0.92
2009 Li Q, Seffernick JL, Sadowsky MJ, Wackett LP. Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073. Applied and Environmental Microbiology. 75: 6986-91. PMID 19767460 DOI: 10.1128/Aem.01605-09  0.92
2009 Seffernick JL, Samanta SK, Louie TM, Wackett LP, Subramanian M. Investigative mining of sequence data for novel enzymes: a case study with nitrilases. Journal of Biotechnology. 143: 17-26. PMID 19539670 DOI: 10.1016/J.Jbiotec.2009.06.004  0.92
2007 Wackett LP, Frias JA, Seffernick JL, Sukovich DJ, Cameron SM. Genomic and biochemical studies demonstrating the absence of an alkane-producing phenotype in Vibrio furnissii M1. Applied and Environmental Microbiology. 73: 7192-8. PMID 17921268 DOI: 10.1128/Aem.01785-07  0.92
2007 Seffernick JL, Aleem A, Osborne JP, Johnson G, Sadowsky MJ, Wackett LP. Hydroxyatrazine N-ethylaminohydrolase (AtzB): an amidohydrolase superfamily enzyme catalyzing deamination and dechlorination. Journal of Bacteriology. 189: 6989-97. PMID 17660279 DOI: 10.1128/Jb.00630-07  0.92
2006 Shapir N, Pedersen C, Gil O, Strong L, Seffernick J, Sadowsky MJ, Wackett LP. TrzN from Arthrobacter aurescens TC1 Is a zinc amidohydrolase. Journal of Bacteriology. 188: 5859-64. PMID 16885454 DOI: 10.1128/Jb.00517-06  0.92
2006 Brown SD, Gerlt JA, Seffernick JL, Babbitt P. A gold standard set of mechanistically diverse enzyme superfamilies Genome Biology. 7. PMID 16507141 DOI: 10.1186/Gb-2006-7-1-R8  0.92
2006 Pegg SC, Brown SD, Ojha S, Seffernick J, Meng EC, Morris JH, Chang PJ, Huang CC, Ferrin TE, Babbitt PC. Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database. Biochemistry. 45: 2545-55. PMID 16489747 DOI: 10.1021/Bi052101L  0.92
2002 Seffernick JL, McTavish H, Osborne JP, de Souza ML, Sadowsky MJ, Wackett LP. Atrazine chlorohydrolase from Pseudomonas sp. strain ADP is a metalloenzyme. Biochemistry. 41: 14430-7. PMID 12450410 DOI: 10.1021/Bi020415S  0.92
2002 Seffernick JL, Shapir N, Schoeb M, Johnson G, Sadowsky MJ, Wackett LP. Enzymatic degradation of chlorodiamino-s-triazine. Applied and Environmental Microbiology. 68: 4672-5. PMID 12200330 DOI: 10.1128/Aem.68.9.4672-4675.2002  0.92
2001 Seffernick JL, Wackett LP. Rapid evolution of bacterial catabolic enzymes: a case study with atrazine chlorohydrolase. Biochemistry. 40: 12747-53. PMID 11669610 DOI: 10.1021/Bi011293R  0.92
2001 Raillard S, Krebber A, Chen Y, Ness JE, Bermudez E, Trinidad R, Fullem R, Davis C, Welch M, Seffernick J, Wackett LP, Stemmer WP, Minshull J. Novel enzyme activities and functional plasticity revealed by recombining highly homologous enzymes. Chemistry & Biology. 8: 891-8. PMID 11564557 DOI: 10.1016/S1074-5521(01)00061-8  0.92
2001 Seffernick JL, de Souza ML, Sadowsky MJ, Wackett LP. Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different. Journal of Bacteriology. 183: 2405-10. PMID 11274097 DOI: 10.1128/Jb.183.8.2405-2410.2001  0.92
2000 Seffernick JL, Johnson G, Sadowsky MJ, Wackett LP. Substrate specificity of atrazine chlorohydrolase and atrazine-catabolizing bacteria. Applied and Environmental Microbiology. 66: 4247-52. PMID 11010866 DOI: 10.1128/Aem.66.10.4247-4252.2000  0.92
1998 De Souza ML, Seffernick J, Martinez B, Sadowsky MJ, Wackett LP. The atrazine catabolism genes atzABC are widespread and highly conserved Journal of Bacteriology. 180: 1951-1954. PMID 9537398 DOI: 10.1128/Jb.180.7.1951-1954.1998  0.92
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