Audrey K. Ellerbee - Publications

Affiliations: 
2010- Applied Physics Stanford University, Palo Alto, CA 
Area:
Biophysics, Electrical Engineering, Imaging, Photonics
Website:
http://web.stanford.edu/dept/app-physics/cgi-bin/person/ellerbee-audrey-k/

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Stan CA, Guglielmini L, Ellerbee AK, Caviezel D, Stone HA, Whitesides GM. Erratum: Sheathless hydrodynamic positioning of buoyant drops and bubbles inside microchannels [Phys. Rev. E 84, 036302 (2011)]. Physical Review. E. 95: 029902. PMID 28297847 DOI: 10.1103/PhysRevE.95.029902  1
2017 Stan CA, Ellerbee AK, Guglielmini L, Stone HA, Whitesides GM. Correction: The magnitude of lift forces acting on drops and bubbles in liquids flowing inside microchannels. Lab On a Chip. PMID 28198493 DOI: 10.1039/c7lc90014g  1
2015 Zarnescu L, Leung MC, Abeyta M, Sudkamp H, Baer T, Behr B, Ellerbee AK. Label-free characterization of vitrification-induced morphology changes in single-cell embryos with full-field optical coherence tomography. Journal of Biomedical Optics. 20: 96004. PMID 26334977 DOI: 10.1117/1.JBO.20.9.096004  1
2015 Lee GC, Smith GT, Agrawal M, Leng T, Ellerbee AK. Fabrication of healthy and disease-mimicking retinal phantoms with tapered foveal pits for optical coherence tomography. Journal of Biomedical Optics. 20: 85004. PMID 26287985 DOI: 10.1117/1.JBO.20.8.085004  1
2015 Smith G, Dwork N, O'Connor D, Sikora U, Lurie K, Pauly J, Ellerbee A. Automated, Depth Resolved Estimation of the Attenuation Coefficient From Optical Coherence Tomography Data. Ieee Transactions On Medical Imaging. PMID 26126286 DOI: 10.1109/TMI.2015.2450197  1
2015 Lurie KL, Gurjarpadhye AA, Seibel EJ, Ellerbee AK. Rapid scanning catheterscope for expanded forward-view volumetric imaging with optical coherence tomography. Optics Letters. 40: 3165-8. PMID 26125393 DOI: 10.1364/OL.40.003165  1
2015 Duan L, Marvdashti T, Ellerbee AK. Polarization-sensitive interleaved optical coherence tomography. Optics Express. 23: 13693-703. PMID 26074618 DOI: 10.1364/OE.23.013693  1
2015 Khan SA, Shi Y, Chang CM, Jan C, Fan S, Ellerbee AK, Solgaard O. Optical separation of heterogeneous size distributions of microparticles on silicon nitride strip waveguides. Optics Express. 23: 8855-66. PMID 25968723 DOI: 10.1364/OE.23.008855  1
2015 Lee HY, Raphael PD, Park J, Ellerbee AK, Applegate BE, Oghalai JS. Noninvasive in vivo imaging reveals differences between tectorial membrane and basilar membrane traveling waves in the mouse cochlea. Proceedings of the National Academy of Sciences of the United States of America. 112: 3128-33. PMID 25737536 DOI: 10.1073/pnas.1500038112  1
2015 Hennek JW, Nemiroski A, Subramaniam AB, Bwambok DK, Yang D, Harburg DV, Tricard S, Ellerbee AK, Whitesides GM. Using magnetic levitation for non-destructive quality control of plastic parts. Advanced Materials (Deerfield Beach, Fla.). 27: 1587-92. PMID 25589230 DOI: 10.1002/adma.201405207  1
2015 Khan SA, Smith GT, Seo F, Ellerbee AK. Label-free and non-contact optical biosensing of glucose with quantum dots. Biosensors & Bioelectronics. 64: 30-5. PMID 25189097 DOI: 10.1016/j.bios.2014.08.035  1
2015 Marvdashti T, Duan L, Ransohoff KJ, Aasi SZ, Tang JY, Ellerbee AK. Towards automated detection of basal cell carcinoma from polarization sensitive optical coherence tomography images of human skin Cleo: Science and Innovations, Cleo-Si 2015. 2267. DOI: 10.1364/CLEO_SI.2015.STh3K.3  1
2015 Mousavi M, Duan L, Javidi T, Ellerbee AK. Alternative techniques for high-resolution spectral estimation of spectrally encoded endoscopy Proceedings of Spie - the International Society For Optical Engineering. 9600. DOI: 10.1117/12.2188459  1
2015 Lurie KL, Mistree BFT, Ellerbee AK. Perspectives of the optical coherence tomography community on code and data sharing Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9312. DOI: 10.1117/12.2082412  1
2015 Lee GCF, Smith GT, Agrawal M, Ellerbee AK. Fabrication of anatomically tapered foveal pits for retinal phantoms for optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9325. DOI: 10.1117/12.2079730  1
2014 Duan L, Lee HY, Lee G, Agrawal M, Smith GT, Ellerbee AK. Single-shot speckle noise reduction by interleaved optical coherence tomography. Journal of Biomedical Optics. 19: 120501. PMID 25486093 DOI: 10.1117/1.JBO.19.12.120501  1
2014 Lee HY, Marvdashti T, Duan L, Khan SA, Ellerbee AK. Scalable multiplexing for parallel imaging with interleaved optical coherence tomography. Biomedical Optics Express. 5: 3192-203. PMID 25401031 DOI: 10.1364/BOE.5.003192  1
2014 Marvdashti T, Duan L, Lurie KL, Smith GT, Ellerbee AK. Quantitative measurements of strain and birefringence with common-path polarization-sensitive optical coherence tomography. Optics Letters. 39: 5507-10. PMID 25360914 DOI: 10.1364/OL.39.005507  1
2014 Duan L, Marvdashti T, Lee A, Tang JY, Ellerbee AK. Automated identification of basal cell carcinoma by polarization-sensitive optical coherence tomography. Biomedical Optics Express. 5: 3717-29. PMID 25360384 DOI: 10.1364/BOE.5.003717  1
2014 Subramaniam AB, Yang D, Yu HD, Nemiroski A, Tricard S, Ellerbee AK, Soh S, Whitesides GM. Noncontact orientation of objects in three-dimensional space using magnetic levitation. Proceedings of the National Academy of Sciences of the United States of America. 111: 12980-5. PMID 25157136 DOI: 10.1073/pnas.1408705111  1
2014 Lurie KL, Angst R, Ellerbee AK. Automated mosaicing of feature-poor optical coherence tomography volumes with an integrated white light imaging system. Ieee Transactions On Bio-Medical Engineering. 61: 2141-53. PMID 24759978 DOI: 10.1109/TBME.2014.2316535  1
2014 Lurie KL, Smith GT, Khan SA, Liao JC, Ellerbee AK. Three-dimensional, distendable bladder phantom for optical coherence tomography and white light cystoscopy. Journal of Biomedical Optics. 19: 36009. PMID 24623158 DOI: 10.1117/1.JBO.19.3.036009  1
2014 Zarnescu L, Abeyta M, Baer TM, Behr B, Ellerbee AK. Assessment of imaging parameters correlated with the effects of cryopreservation on embryo development Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8953. DOI: 10.1117/12.2040487  1
2014 Khan SA, Smith GT, Ellerbee AK. Label-free assay for the detection of glucose mediated by the effects of narrowband absorption on quantum dot photoluminescence Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8933. DOI: 10.1117/12.2039963  1
2014 Gutierrez Da Costa HS, Maxey JR, Silva L, Ellerbee AK. Evaluation of fingerprint deformation using optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8946. DOI: 10.1117/12.2038694  1
2014 Mousavi M, Lurie K, Land J, Javidi T, Ellerbee AK. Telemedicine + OCT: Toward design of optimized algorithms for high-quality compressed images Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8936. DOI: 10.1117/12.2038530  1
2014 Smith GT, Lurie KL, Khan SA, Liao JC, Ellerbee AK. Multilayered disease-mimicking bladder phantom with realistic surface topology for optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8945. DOI: 10.1117/12.2036402  1
2014 Lurie KL, Ellerbee AK. Volumetric mosaicing for optical coherence tomography for large area bladder wall visualization Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8926. DOI: 10.1117/12.2036325  1
2014 Khan SA, Chang CM, Jan C, Scouros E, Ellerbee AK, Solgaard O. Optical propulsion and sorting of microparticles on silicon nitride strip waveguides International Conference On Optical Mems and Nanophotonics. 185-186. DOI: 10.1109/OMN.2014.6924585  1
2014 Ellerbee AK. Optical coherence tomography: Technology and applications 2014 Ieee Photonics Conference, Ipc 2014. 7-8. DOI: 10.1109/IPCon.2014.6994962  1
2014 Duan L, Marvdashti T, Lee A, Tang JY, Ellerbee AK. Automated classification of basal cell carcinoma in mouse skin by polarization sensitive optical coherence tomography Optics Infobase Conference Papers 1
2013 Lee HY, Sudkamp H, Marvdashti T, Ellerbee AK. Interleaved optical coherence tomography. Optics Express. 21: 26542-56. PMID 24216876 DOI: 10.1364/OE.21.026542  1
2013 Stan CA, Ellerbee AK, Guglielmini L, Stone HA, Whitesides GM. The magnitude of lift forces acting on drops and bubbles in liquids flowing inside microchannels. Lab On a Chip. 13: 365-76. PMID 23212283 DOI: 10.1039/c2lc41035d  1
2013 Lee HY, Ellerbee AK. Single-shot interpixel shifting for optical coherence tomography by oblique incidence spectroscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8571. DOI: 10.1117/12.2007197  1
2013 Marvdashti T, Lee HY, Ellerbee AK. High-resolution spectrometer: Solution to the axial resolution and ranging depth trade-off of SD-OCT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8572. DOI: 10.1117/12.2003865  1
2013 Gu RY, Lurie KL, Ellerbee AK. Air Force test chart-like phantom for measuring axial and lateral resolution in optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8583. DOI: 10.1117/12.2003189  1
2012 Gu RY, Lurie KL, Pipes M, Ellerbee AK. Variable-sized bar targets for characterizing three-dimensional resolution in OCT. Biomedical Optics Express. 3: 2317-25. PMID 23024923 DOI: 10.1364/BOE.3.002317  1
2012 Lurie KL, Moritz TJ, Ellerbee AK. Design considerations for polarization-sensitive optical coherence tomography with a single input polarization state. Biomedical Optics Express. 3: 2273-87. PMID 23024919 DOI: 10.1364/BOE.3.002273  1
2012 Ling WA, Ellerbee AK. The effects of reduced bit depth on optical coherence tomography phase data. Optics Express. 20: 15654-68. PMID 22772258 DOI: 10.1364/OE.20.015654  1
2012 Copeland CN, Ellerbee AK. The effects of different gold standards on the accuracy of optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8225. DOI: 10.1117/12.909328  1
2012 Copeland CN, Ellerbee AK. Analysis of the effects of different resampling techniques for optical coherence tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8227. DOI: 10.1117/12.909268  1
2012 Ling WA, Ellerbee AK. Effects of reduced bit-depth on phase data in common-path optical coherence tomography Biomedical Optics, Biomed 2012. BTu3A.92.  1
2012 Lurie KL, Ellerbee AK. New design options for polarization-sensitive optical coherence tomography Biomedical Optics, Biomed 2012. BTu3A.84.  1
2011 Stan CA, Guglielmini L, Ellerbee AK, Caviezel D, Stone HA, Whitesides GM. Sheathless hydrodynamic positioning of buoyant drops and bubbles inside microchannels. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 84: 036302. PMID 22060487 DOI: 10.1103/PhysRevE.84.036302  1
2011 Choi W, Hashimoto M, Ellerbee AK, Chen X, Bishop KJ, Garstecki P, Stone HA, Whitesides GM. Bubbles navigating through networks of microchannels. Lab On a Chip. 11: 3970-8. PMID 22001964 DOI: 10.1039/c1lc20444k  1
2011 Mirica KA, Ilievski F, Ellerbee AK, Shevkoplyas SS, Whitesides GM. Using magnetic levitation for three dimensional self-assembly. Advanced Materials (Deerfield Beach, Fla.). 23: 4134-40. PMID 21830239 DOI: 10.1002/adma.201101917  1
2011 Ilievski F, Mirica KA, Ellerbee AK, Whitesides GM. Templated self-assembly in three dimensions using magnetic levitation Soft Matter. 7: 9113-9118. DOI: 10.1039/c1sm05962a  1
2009 Ellerbee AK, Phillips ST, Siegel AC, Mirica KA, Martinez AW, Striehl P, Jain N, Prentiss M, Whitesides GM. Quantifying colorimetric assays in paper-based microfluidic devices by measuring the transmission of light through paper. Analytical Chemistry. 81: 8447-52. PMID 19722495 DOI: 10.1021/ac901307q  1
2009 Hashimoto M, Feng J, York RL, Ellerbee AK, Morrison G, Thomas SW, Mahadevan L, Whitesides GM. Infochemistry: encoding information as optical pulses using droplets in a microfluidic device. Journal of the American Chemical Society. 131: 12420-9. PMID 19655796 DOI: 10.1021/ja904788m  1
2008 Ellerbee AK, Hendargo HC, Motomura AR, Izatt JA. Extension of spectral domain phase microscopy to three-dimensional nanoscale displacement mapping in cardiomyocytes Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6861. DOI: 10.1117/12.765239  1
2008 Ellerbee A. Making policy a priority Optics and Photonics News. 19: 10-11.  1
2007 Ellerbee AK, Creazzo TL, Izatt JA. Investigating nanoscale cellular dynamics with cross-sectional spectral domain phase microscopy. Optics Express. 15: 8115-24. PMID 19547138 DOI: 10.1364/OE.15.008115  1
2007 McDowell EJ, Ellerbee AK, Choma MA, Applegate BE, Izatt JA. Spectral domain phase microscopy for local measurements of cytoskeletal rheology in single cells. Journal of Biomedical Optics. 12: 044008. PMID 17867812 DOI: 10.1117/1.2753755  1
2007 Ellerbee AK, Izatt JA. Phase retrieval in low-coherence interferometric microscopy. Optics Letters. 32: 388-90. PMID 17356662 DOI: 10.1364/OL.32.000388  1
2007 Ellerbee AK, Creazzo TL, Izatt JA. Examining cardiomyocyte development with spectral domain phase microscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6441. DOI: 10.1117/12.701035  1
2006 Choma MA, Ellerbee AK, Yazdanfar S, Izatt JA. Doppler flow imaging of cytoplasmic streaming using spectral domain phase microscopy. Journal of Biomedical Optics. 11: 024014. PMID 16674204 DOI: 10.1117/1.2193167  1
2006 Sarunic M, Weinberg S, Ellerbee A, Applegate B, Izatt J. Full-field swept-source phase microscopy Proceedings of Spie - the International Society For Optical Engineering. 6079. DOI: 10.1117/12.649206  1
2006 Ellerbee AK, Izatt JA, Creazzo TL. High speed spectral domain phase microscopy for quantitative cell surface and cytoplasmic flow measurements Optics Infobase Conference Papers 1
2005 Choma MA, Ellerbee AK, Yang C, Creazzo TL, Izatt JA. Spectral-domain phase microscopy. Optics Letters. 30: 1162-4. PMID 15945141 DOI: 10.1364/OL.30.001162  1
2005 McDowell EJ, Choma MA, Ellerbee AK, Izatt JA. Spectral domain phase microscopy: A new tool for measuring cellular dynamics and cytoplasmic flow Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5701: 182-189. DOI: 10.1117/12.601505  1
2005 Ellerbee AK, Choma MA, McDowell EJ, Creazzo AL, Izatt JA. Characterizing cellular contractility and cytoplasmic flow using spectral domain phase microscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5690: 403-407. DOI: 10.1117/12.592809  1
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