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Jonathan J. Ipsaro, Ph.D. - Publications

Affiliations: 
Interdepartmental Biological Sciences Program Northwestern University, Evanston, IL 
Area:
structure and function of proteins and nucleic acids
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Qian Z, Song D, Ipsaro JJ, Bautista C, Joshua-Tor L, Yeh JT, Tonks NK. Manipulating PTPRD function with ectodomain antibodies. Genes & Development. PMID 37669874 DOI: 10.1101/gad.350713.123  0.578
2023 Lee SC, Adams DW, Ipsaro JJ, Cahn J, Lynn J, Kim HS, Berube B, Major V, Calarco JP, LeBlanc C, Bhattacharjee S, Ramu U, Grimanelli D, Jacob Y, Voigt P, et al. Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation. Cell. PMID 37643610 DOI: 10.1016/j.cell.2023.08.001  0.567
2023 Lee SC, Adams DW, Ipsaro JJ, Cahn J, Lynn J, Kim HS, Berube B, Major V, Calarco JP, LeBlanc C, Bhattacharjee S, Ramu U, Grimanelli D, Jacob Y, Voigt P, et al. Chromatin remodeling of histone H3 variants underlies epigenetic inheritance of DNA methylation. Biorxiv : the Preprint Server For Biology. PMID 37503143 DOI: 10.1101/2023.07.11.548598  0.577
2023 Gao Y, He XY, Wu XS, Huang YH, Toneyan S, Ha T, Ipsaro JJ, Koo PK, Joshua-Tor L, Bailey KM, Egeblad M, Vakoc CR. ETV6 dependency in Ewing sarcoma by antagonism of EWS-FLI1-mediated enhancer activation. Nature Cell Biology. PMID 36658219 DOI: 10.1038/s41556-022-01060-1  0.597
2022 Wu XS, He XY, Ipsaro JJ, Huang YH, Preall JB, Ng D, Shue YT, Sage J, Egeblad M, Joshua-Tor L, Vakoc CR. OCA-T1 and OCA-T2 are coactivators of POU2F3 in the tuft cell lineage. Nature. PMID 35576971 DOI: 10.1038/s41586-022-04842-7  0.551
2022 Ipsaro JJ, Joshua-Tor L. Developmental roles and molecular mechanisms of Asterix/GTSF1. Wiley Interdisciplinary Reviews. Rna. e1716. PMID 35108755 DOI: 10.1002/wrna.1716  0.598
2021 Ipsaro JJ, O'Brien PA, Bhattacharya S, Palmer AG, Joshua-Tor L. Asterix/Gtsf1 links tRNAs and piRNA silencing of retrotransposons. Cell Reports. 34: 108914. PMID 33789107 DOI: 10.1016/j.celrep.2021.108914  0.647
2019 Stein CB, Genzor P, Mitra S, Elchert AR, Ipsaro JJ, Benner L, Sobti S, Su Y, Hammell M, Joshua-Tor L, Haase AD. Decoding the 5' nucleotide bias of PIWI-interacting RNAs. Nature Communications. 10: 828. PMID 30783109 DOI: 10.1038/S41467-019-08803-Z  0.615
2017 Ipsaro JJ, Shen C, Arai E, Xu Y, Kinney JB, Joshua-Tor L, Vakoc CR, Shi J. Rapid generation of drug-resistance alleles at endogenous loci using CRISPR-Cas9 indel mutagenesis. Plos One. 12: e0172177. PMID 28231254 DOI: 10.1371/Journal.Pone.0172177  0.575
2016 Shen C, Ipsaro JJ, Shi J, Vakoc CR. Abstract 884: NSD3-short is an adaptor protein that couples BRD4 to the CHD8 chromatin remodeler Cancer Research. 76: 884-884. DOI: 10.1158/1538-7445.Am2016-884  0.434
2015 Shen C, Ipsaro JJ, Shi J, Milazzo JP, Wang E, Roe JS, Suzuki Y, Pappin DJ, Joshua-Tor L, Vakoc CR. NSD3-Short Is an Adaptor Protein that Couples BRD4 to the CHD8 Chromatin Remodeler. Molecular Cell. PMID 26626481 DOI: 10.1016/J.Molcel.2015.10.033  0.65
2015 Ipsaro JJ, Joshua-Tor L. From guide to target: molecular insights into eukaryotic RNA-interference machinery. Nature Structural & Molecular Biology. 22: 20-8. PMID 25565029 DOI: 10.1038/Nsmb.2931  0.607
2012 Ipsaro JJ, Haase AD, Knott SR, Joshua-Tor L, Hannon GJ. The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis Nature. 491: 279-282. PMID 23064227 DOI: 10.1038/Nature11502  0.624
2012 Yasunaga M, Ipsaro JJ, Mondragón A. Structurally similar but functionally diverse ZU5 domains in human erythrocyte ankyrin. Journal of Molecular Biology. 417: 336-50. PMID 22310050 DOI: 10.1016/J.Jmb.2012.01.041  0.682
2011 Strauch RC, Mastarone DJ, Sukerkar PA, Song Y, Ipsaro JJ, Meade TJ. Reporter protein-targeted probes for magnetic resonance imaging. Journal of the American Chemical Society. 133: 16346-9. PMID 21942425 DOI: 10.1021/Ja206134B  0.304
2010 Ipsaro JJ, Harper SL, Messick TE, Marmorstein R, Mondragón A, Speicher DW. Crystal structure and functional interpretation of the erythrocyte spectrin tetramerization domain complex. Blood. 115: 4843-52. PMID 20197550 DOI: 10.1182/Blood-2010-01-261396  0.698
2010 Ipsaro JJ, Mondragón A. Structural basis for spectrin recognition by ankyrin. Blood. 115: 4093-101. PMID 20101027 DOI: 10.1182/Blood-2009-11-255604  0.638
2009 Ipsaro JJ, Huang L, Mondragón A. Structures of the spectrin-ankyrin interaction binding domains. Blood. 113: 5385-93. PMID 19141864 DOI: 10.1182/Blood-2008-10-184358  0.626
2008 Ipsaro JJ, Huang L, Gutierrez L, MacDonald RI. Molecular epitopes of the ankyrin-spectrin interaction. Biochemistry. 47: 7452-64. PMID 18563915 DOI: 10.1021/Bi702525Z  0.325
2007 Wuchty S, Ipsaro JJ. A draft of protein interactions in the malaria parasite P. falciparum. Journal of Proteome Research. 6: 1461-70. PMID 17300188 DOI: 10.1021/Pr0605769  0.326
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