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James E. Rothman - Related publications

1978-1988 Biochemistry Stanford University, Palo Alto, CA 
 1988-1991 Molecular Biology Princeton University, Princeton, NJ 
 1991-2004 Cellular Biochemistry and Biophysics Memorial Sloan-Kettering Cancer Center, Rockville Centre, NY, United States 
 2004-2008 Cellular Biophysics Columbia University, New York, NY 
 2008- Cell Biology Yale University, New Haven, CT 
Secretion, membrane fusion
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Huang Y, Yin H, Li B, Wu Q, Liu Y, Poljak K, Maldutyte J, Tang X, Wang M, Wu Z, Miller EA, Jiang L, Yao ZP, Guo Y. An in vitro vesicle formation assay reveals cargo clients and factors that mediate vesicular trafficking. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34433667 DOI: 10.1073/pnas.2101287118   
2021 Tiffert T, Lew VL. Osmotic Vesicle Collapse of Sealed Inside-Out Membrane Vesicles From Red Blood Cells. Frontiers in Physiology. 12: 727726. PMID 34512397 DOI: 10.3389/fphys.2021.727726   
2021 Shin W, Wei L, Arpino G, Ge L, Guo X, Chan CY, Hamid E, Shupliakov O, Bleck CKE, Wu LG. Preformed Ω-profile closure and kiss-and-run mediate endocytosis and diverse endocytic modes in neuroendocrine chromaffin cells. Neuron. PMID 34411513 DOI: 10.1016/j.neuron.2021.07.019   
2021 Otrin L, Witkowska A, Marušič N, Zhao Z, Lira RB, Kyrilis FL, Hamdi F, Ivanov I, Lipowsky R, Kastritis PL, Dimova R, Sundmacher K, Jahn R, Vidaković-Koch T. En route to dynamic life processes by SNARE-mediated fusion of polymer and hybrid membranes. Nature Communications. 12: 4972. PMID 34404795 DOI: 10.1038/s41467-021-25294-z   
2021 Bekku Y, Salzer JL. Dual Color, Live Imaging of Vesicular Transport in Axons of Cultured Sensory Neurons. Bio-Protocol. 11: e4067. PMID 34263008 DOI: 10.21769/BioProtoc.4067   
2021 Khounlo R, Hawk BJD, Khu TM, Yoo G, Lee NK, Pierson J, Shin YK. Membrane Binding of α-Synuclein Stimulates Expansion of SNARE-Dependent Fusion Pore. Frontiers in Cell and Developmental Biology. 9: 663431. PMID 34350173 DOI: 10.3389/fcell.2021.663431   
2021 Cao S, Yang J, Fu J, Chen H, Jia H. The Dissection of SNAREs Reveals Key Factors for Vesicular Trafficking to the Endosome-like Compartment and Apicoplast via the Secretory System in Toxoplasma gondii. Mbio. e0138021. PMID 34340555 DOI: 10.1128/mBio.01380-21   
2021 Moro S, Moscoso-Romero E, Poddar A, Mulet JM, Perez P, Chen Q, Valdivieso MH. Exomer Is Part of a Hub Where Polarized Secretion and Ionic Stress Connect. Frontiers in Microbiology. 12: 708354. PMID 34349749 DOI: 10.3389/fmicb.2021.708354   
2021 Iriondo MN, Etxaniz A, Antón Z, Montes LR, Alonso A. Molecular and mesoscopic geometries in autophagosome generation. A review. Biochimica Et Biophysica Acta. Biomembranes. 1863: 183731. PMID 34419487 DOI: 10.1016/j.bbamem.2021.183731   
2021 Zhang W, Yang X, Chen L, Liu YY, Venkatarangan V, Reist L, Hanson P, Xu H, Wang Y, Li M. A  conserved ubiquitin- and ESCRT-dependent pathway internalizes human lysosomal membrane proteins for degradation. Plos Biology. 19: e3001361. PMID 34297722 DOI: 10.1371/journal.pbio.3001361   
2021 Kaplan M, Chreifi G, Metskas LA, Liedtke J, Wood CR, Oikonomou CM, Nicolas WJ, Subramanian P, Zacharoff LA, Wang Y, Chang YW, Beeby M, Dobro M, Zhu Y, McBride M, et al. imaging of bacterial outer membrane projections and associated protein complexes using electron cryo-tomography. Elife. 10. PMID 34468314 DOI: 10.7554/eLife.73099   
2021 Holst MR, Gammelgaard L, Aaron J, Login FH, Rajkumar S, Hahn U, Nejsum LN. Regulated exocytosis: Renal Aquaporin-2 3D Vesicular Network Organization and Association with F-actin. American Journal of Physiology. Cell Physiology. PMID 34432538 DOI: 10.1152/ajpcell.00255.2021   
2021 Cao S, Peterson SM, Müller S, Reichelt M, McRoberts Amador C, Martinez-Martin N. A membrane protein display platform for receptor interactome discovery. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34531301 DOI: 10.1073/pnas.2025451118   
2021 Xun C, Wang L, Yang H, Xiao Z, Deng M, Xu R, Zhou X, Chen P, Liu Z. Origin and Characterization of Extracellular Vesicles Present in the Spider Venom of . Toxins. 13. PMID 34437450 DOI: 10.3390/toxins13080579   
2021 Zhang L, Liu W, Zhang X, Li L, Wang X. Southern rice black-streaked dwarf virus hijacks SNARE complex of its insect vector for its effective transmission to rice. Molecular Plant Pathology. PMID 34390118 DOI: 10.1111/mpp.13109   
2021 Wei C, Pohorille A. Fast bilayer-micelle fusion mediated by hydrophobic dipeptides. Biophysical Journal. 120: 2330-2342. PMID 33887225 DOI: 10.1016/j.bpj.2021.04.012   
2021 Vellosillo T, Dinneny JR, Somerville CR, Ehrhardt DW. TRANVIA (TVA) facilitates cellulose synthase trafficking and delivery to the plasma membrane. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34290139 DOI: 10.1073/pnas.2021790118   
2021 Abolbaghaei A, Langlois MA, Murphy HR, Feig DS, Burger D, . Circulating extracellular vesicles during pregnancy in women with type 1 diabetes: a secondary analysis of the CONCEPTT trial. Biomarker Research. 9: 67. PMID 34488911 DOI: 10.1186/s40364-021-00322-8   
2021 Fuzita FJ, Palmisano G, Pimenta DC, Terra WR, Ferreira C. A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 257: 110670. PMID 34438074 DOI: 10.1016/j.cbpb.2021.110670   
2021 Suzuki SW, Oishi A, Nikulin N, Jorgensen JR, Baile MG, Emr SD. A PX-BAR protein Mvp1/SNX8 and a dynamin-like GTPase Vps1 drive endosomal recycling. Elife. 10. PMID 34524084 DOI: 10.7554/eLife.69883   
2021 Krones D, Rühling M, Becker KA, Kunz TC, Sehl C, Paprotka K, Gulbins E, Fraunholz M. α-Toxin Induces Acid Sphingomyelinase Release From a Human Endothelial Cell Line. Frontiers in Microbiology. 12: 694489. PMID 34394034 DOI: 10.3389/fmicb.2021.694489   
2021 Nandi S, Ghosh B, Ghosh M, Layek S, Nandi PK, Sarkar N. Phenylalanine Interacts with Oleic Acid-Based Vesicle Membrane. Understanding the Molecular Role of Fibril-Vesicle Interaction under the Context of Phenylketonuria. The Journal of Physical Chemistry. B. PMID 34420302 DOI: 10.1021/acs.jpcb.1c05592   
2021 Yeh V, Bonev BB. Solid state NMR of membrane proteins: methods and applications. Biochemical Society Transactions. PMID 34397082 DOI: 10.1042/BST20200070   
2021 Nellikka RK, Bhaskar BR, Sanghrajka K, Patil SS, Das D. α-Synuclein kinetically regulates the nascent fusion pore dynamics. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34413185 DOI: 10.1073/pnas.2021742118   
2021 Hatamie A, Ren L, Zhang X, Ewing AG. Vesicle Impact Electrochemical Cytometry to Determine Carbon Nanotube-Induced Fusion of Intracellular Vesicles. Analytical Chemistry. PMID 34499839 DOI: 10.1021/acs.analchem.1c01462   
2021 Synek L, Pleskot R, Sekereš J, Serrano N, Vukašinović N, Ortmannová J, Klejchová M, Pejchar P, Batystová K, Gutkowska M, Janková-Drdová E, Marković V, Pečenková T, Šantrůček J, Žárský V, et al. Plasma membrane phospholipid signature recruits the plant exocyst complex via the EXO70A1 subunit. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34470819 DOI: 10.1073/pnas.2105287118   
2021 Vevea JD, Kusick GF, Courtney KC, Chen E, Watanabe S, Chapman ER. Synaptotagmin 7 is targeted to the axonal plasma membrane through γ-secretase processing to promote synaptic vesicle docking in mouse hippocampal neurons. Elife. 10. PMID 34543184 DOI: 10.7554/eLife.67261   
2021 Basso LGM, Zeraik AE, Felizatti AP, Costa-Filho AJ. Membranotropic and biological activities of the membrane fusion peptides from SARS-CoV spike glycoprotein: The importance of the complete internal fusion peptide domain. Biochimica Et Biophysica Acta. Biomembranes. 1863: 183697. PMID 34274319 DOI: 10.1016/j.bbamem.2021.183697   
2021 Choi W, Ryu H, Fuwad A, Goh S, Zhou C, Shim J, Takagi M, Kwon S, Kim SM, Jeon TJ. Quantitative Analysis of the Membrane Affinity of Local Anesthetics Using a Model Cell Membrane. Membranes. 11. PMID 34436342 DOI: 10.3390/membranes11080579   
2021 Chen X, Liu T, Qin X, Nguyen QQ, Lee SK, Lee C, Ren Y, Chu J, Zhu G, Yoon TY, Park CY, Park H. Simultaneous Real-Time Three-Dimensional Localization and FRET Measurement of Two Distinct Particles. Nano Letters. PMID 34491760 DOI: 10.1021/acs.nanolett.1c01328   
2021 Hussain S, Peterson JH, Bernstein HD. Reconstitution of Bam Complex-Mediated Assembly of a Trimeric Porin into Proteoliposomes. Mbio. e0169621. PMID 34399610 DOI: 10.1128/mBio.01696-21   
2021 Tyagi V, Vasquez-Montes V, Freites JA, Kyrychenko A, Tobias DJ, Ladokhin AS. Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL. International Journal of Molecular Sciences. 22. PMID 34502299 DOI: 10.3390/ijms22179388   
2021 Alford RF, Gray JJ. Membrane Protein Engineering with Rosetta. Methods in Molecular Biology (Clifton, N.J.). 2315: 43-57. PMID 34302669 DOI: 10.1007/978-1-0716-1468-6_3   
2021 López-Andarias J, Straková K, Martinent R, Jiménez-Rojo N, Riezman H, Sakai N, Matile S. Genetically Encoded Supramolecular Targeting of Fluorescent Membrane Tension Probes within Live Cells: Precisely Localized Controlled Release by External Chemical Stimulation. Jacs Au. 1: 221-232. PMID 34467286 DOI: 10.1021/jacsau.0c00069   
2021 Pazo M, Salluce G, Lostalé-Seijo I, Juanes M, Gonzalez F, Garcia-Fandiño R, Montenegro J. Short oligoalanine helical peptides for supramolecular nanopore assembly and protein cytosolic delivery. Rsc Chemical Biology. 2: 503-512. PMID 34458796 DOI: 10.1039/d0cb00103a   
2021 Müntjes K, Devan SK, Reichert AS, Feldbrügge M. Linking transport and translation of mRNAs with endosomes and mitochondria. Embo Reports. e52445. PMID 34402186 DOI: 10.15252/embr.202152445   
2021 Wang J, Wang S, Ferro-Novick S. Methods for Assessing the Regulation of a Kinase by the Rab GTPase Ypt1. Methods in Molecular Biology (Clifton, N.J.). 2293: 201-211. PMID 34453719 DOI: 10.1007/978-1-0716-1346-7_14   
2021 Has C, Das SL. Recent developments in membrane curvature sensing and induction by proteins. Biochimica Et Biophysica Acta. General Subjects. 129971. PMID 34333084 DOI: 10.1016/j.bbagen.2021.129971   
2021 Yang L, Catalano C, Xu Y, Qiu W, Zhang D, McDermott A, Guo Y, Blount P. A native cell membrane nanoparticles system allows for high-quality functional proteoliposome reconstitution. Bba Advances. 1. PMID 34296205 DOI: 10.1016/j.bbadva.2021.100011   
2021 Yang L, Catalano C, Xu Y, Qiu W, Zhang D, McDermott A, Guo Y, Blount P. A native cell membrane nanoparticles system allows for high-quality functional proteoliposome reconstitution. Bba Advances. 1. PMID 34296205 DOI: 10.1016/j.bbadva.2021.100011   
2021 Zhang L, Ma J, Liu H, Yi Q, Wang Y, Xing J, Zhang P, Ji S, Li M, Li J, Shen J, Lin J. SNARE proteins VAMP721 and VAMP722 mediate the post-Golgi trafficking required for auxin-mediated development in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 34343378 DOI: 10.1111/tpj.15450   
2021 Guardia CM, Jain A, Mattera R, Friefeld A, Li Y, Bonifacino JS. RUSC2 and WDR47 oppositely regulate kinesin-1-dependent distribution of ATG9A to the cell periphery. Molecular Biology of the Cell. mbcE21060295. PMID 34432492 DOI: 10.1091/mbc.E21-06-0295   
2021 Asadpour F, Zhang XW, Mazloum-Ardakani M, Mirzaei M, Majdi S, Ewing AG. Vesicular release dynamics are altered by the interaction between the chemical cargo and vesicle membrane lipids. Chemical Science. 12: 10273-10278. PMID 34447531 DOI: 10.1039/d1sc02247d   
2021 Yuan H, Novick P. Testing the Phenotypic Effects of a Rab Chimera that Resolves Exchange Factor Specificity from Effector Specificity. Methods in Molecular Biology (Clifton, N.J.). 2293: 57-67. PMID 34453710 DOI: 10.1007/978-1-0716-1346-7_5   
2021 Lozada C, Barlow TMA, Gonzalez S, Lubin-Germain N, Ballet S. Identification and Characteristics of Fusion Peptides Derived From Enveloped Viruses. Frontiers in Chemistry. 9: 689006. PMID 34497798 DOI: 10.3389/fchem.2021.689006   
2021 Rose M, Kurylowicz M, Mahmood M, Winkel S, Moran-Mirabal JM, Fradin C. Direct Measurement of the Affinity between tBid and Bax in a Mitochondria-Like Membrane. International Journal of Molecular Sciences. 22. PMID 34361006 DOI: 10.3390/ijms22158240   
2021 Kam KL, Parrack P, Banworth M, Aravindan S, Li G, Fung KM. Use of Immunohistochemistry to Determine Expression of Rab5 Subfamily of GTPases in Mature and Developmental Brains. Methods in Molecular Biology (Clifton, N.J.). 2293: 265-271. PMID 34453724 DOI: 10.1007/978-1-0716-1346-7_19   
2021 Coukos RW, Yao D, Sanchez ML, Strand ET, Olive ME, Udeshi ND, Weissman JS, Carr SA, Bassik MC, Ting AY. An engineered transcriptional reporter of protein localization identifies regulators of mitochondrial and ER membrane protein trafficking in high-throughput CRISPRi screens. Elife. 10. PMID 34414886 DOI: 10.7554/eLife.69142   
2021 Wu B, Woo JS, Vila P, Jew M, Leung J, Sun Z, Srikanth S, Gwack Y. NKD2 mediates stimulation-dependent ORAI1 trafficking to augment Ca entry in T cells. Cell Reports. 36: 109603. PMID 34433025 DOI: 10.1016/j.celrep.2021.109603   
2021 Gao X, Wang L, Liu C, Luo S, Du C, Jin S, Zhu J. Ultrastructure evidence for vesicles and double-membrane structures involved in cytoplasmic elimination during spermiogenesis in large yellow croaker, Larimichthys crocea (Teleostei, Perciformes, Scienidae). Micron (Oxford, England : 1993). 150: 103122. PMID 34352468 DOI: 10.1016/j.micron.2021.103122