Balaji S. Srinivasan, Ph.D. - Publications

Stanford University, Palo Alto, CA
bacterial genetic regulation

39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Oleaga C, Bernabini C, Smith AS, Srinivasan B, Jackson M, McLamb W, Platt V, Bridges R, Cai Y, Santhanam N, Berry B, Najjar S, Akanda N, Guo X, Martin C, et al. Multi-Organ toxicity demonstration in a functional human in vitro system composed of four organs. Scientific Reports. 6: 20030. PMID 26837601 DOI: 10.1038/srep20030  0.68
2016 Dutta R, Dewan A, Srinivasan B. CFD study of slot jet impingement heat transfer with nanofluids Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 230: 206-220. DOI: 10.1177/0954406215583521  0.68
2015 Srinivasan B, Baratashvili M, Van Der Zwaag M, Kanon B, Colombelli C, Lambrechts RA, Schaap O, Nollen EA, Podgoršek A, Kosec G, Petković H, Hayflick S, Tiranti V, Reijngoud DJ, Grzeschik NA, et al. Extracellular 4′-phosphopantetheine is a source for intracellular coenzyme A synthesis Nature Chemical Biology. 11: 784-792. PMID 26322826 DOI: 10.1038/nchembio.1906  0.68
2015 Srinivasan B, Kolli AR, Esch MB, Abaci HE, Shuler ML, Hickman JJ. TEER measurement techniques for in vitro barrier model systems. Journal of Laboratory Automation. 20: 107-26. PMID 25586998 DOI: 10.1177/2211068214561025  0.68
2015 Chaudhary S, Srivastava V, Kumar VVKS, Srinivasan B. WEB-Spline-based mesh-free finite element approximation for p-Laplacian International Journal of Computer Mathematics. DOI: 10.1080/00207160.2015.1016923  0.68
2015 Kumar V, Srinivasan B. An adaptive mesh strategy for singularly perturbed convection diffusion problems Applied Mathematical Modelling. 39: 2081-2091. DOI: 10.1016/J.Apm.2014.10.019  0.68
2015 Srivastava V, Chaudhary S, Kumar VVKS, Srinivasan B. Fully discrete finite element scheme for nonlocal parabolic problem involving the Dirichlet energy Journal of Applied Mathematics and Computing. 1-31. DOI: 10.1007/S12190-015-0975-6  0.68
2014 Srinivasan B, Sibon OC. Coenzyme A, more than 'just' a metabolic cofactor. Biochemical Society Transactions. 42: 1075-9. PMID 25110005 DOI: 10.1042/BST20140125  0.68
2014 Sung JH, Srinivasan B, Esch MB, McLamb WT, Bernabini C, Shuler ML, Hickman JJ. Using physiologically-based pharmacokinetic-guided "body-on-a-chip" systems to predict mammalian response to drug and chemical exposure. Experimental Biology and Medicine (Maywood, N.J.). 239: 1225-39. PMID 24951471 DOI: 10.1177/1535370214529397  0.68
2014 Danish M, Suman S, Srinivasan B. A direct numerical simulation-based investigation and modeling of pressure Hessian effects on compressible velocity gradient dynamics Physics of Fluids. 26. DOI: 10.1063/1.4904869  0.68
2013 Lazarin GA, Haque IS, Nazareth S, Iori K, Patterson AS, Jacobson JL, Marshall JR, Seltzer WK, Patrizio P, Evans EA, Srinivasan BS. An empirical estimate of carrier frequencies for 400+ causal Mendelian variants: results from an ethnically diverse clinical sample of 23,453 individuals. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 178-86. PMID 22975760 DOI: 10.1097/01.Ogx.0000433843.26579.49  0.68
2013 Lazarin GA, Haque IS, Nazareth S, Iori K, Patterson AS, Jacobson JL, Marshall JR, Seltzer WK, Patrizio P, Evans EA, Srinivasan BS. An empirical estimate of carrier frequencies for 400+ causal mendelian variants: Results from an ethnically diverse clinical sample of 23,453 individuals Obstetrical and Gynecological Survey. 68: 557-559. DOI: 10.1097/01.ogx.0000433843.26579.49  0.68
2013 Dutta R, Srinivasan B, Dewan A. LES of a turbulent slot impinging jet to predict fluid flow and heat transfer Numerical Heat Transfer; Part a: Applications. 64: 759-776. DOI: 10.1080/10407782.2013.798577  0.68
2013 Dutta R, Dewan A, Srinivasan B. Comparison of various integration to wall (ITW) RANS models for predicting turbulent slot jet impingement heat transfer International Journal of Heat and Mass Transfer. 65: 750-764. DOI: 10.1016/J.Ijheatmasstransfer.2013.06.056  0.68
2012 Ready K, Haque IS, Srinivasan BS, Marshall JR. Knowledge and attitudes regarding expanded genetic carrier screening among women's healthcare providers. Fertility and Sterility. 97: 407-13. PMID 22137493 DOI: 10.1016/J.Fertnstert.2011.11.007  0.68
2012 Dewan A, Dutta R, Srinivasan B. Recent trends in computation of turbulent jet impingement heat transfer Heat Transfer Engineering. 33: 447-460. DOI: 10.1080/01457632.2012.614154  0.68
2012 Srinivasan B, Jameson A, Krishnamoorthy S. An upwinded state approximate Riemann solver International Journal For Numerical Methods in Fluids. 70: 578-602. DOI: 10.1002/Fld.2701  0.68
2012 Dutta R, Dewan A, Srinivasan B. Unsteady simulations of flow and heat transfer in a plane turbulent impinging jet using URANS, DES and LES Eccomas 2012 - European Congress On Computational Methods in Applied Sciences and Engineering, E-Book Full Papers. 1087-1099.  0.68
2011 Siudeja K, Srinivasan B, Xu L, Rana A, de Jong J, Nollen EA, Jackowski S, Sanford L, Hayflick S, Sibon OC. Impaired Coenzyme A metabolism affects histone and tubulin acetylation in Drosophila and human cell models of pantothenate kinase associated neurodegeneration. Embo Molecular Medicine. 3: 755-66. PMID 21998097 DOI: 10.1002/emmm.201100180  0.68
2011 Singh B, Srinivasan B, Narsipur SS. Effect of Simvastatin use on autonomic Function in Patients with end Stage Renal Disease Cardiovascular and Hematological Disorders - Drug Targets. 11: 53-57. PMID 21446902 DOI: 10.2174/187152911795945178  0.68
2010 Srinivasan BS, Evans EA, Flannick J, Patterson AS, Chang CC, Pham T, Young S, Kaushal A, Lee J, Jacobson JL, Patrizio P. A universal carrier test for the long tail of Mendelian disease. Reproductive Biomedicine Online. 21: 537-51. PMID 20729146 DOI: 10.1016/J.Rbmo.2010.05.012  0.68
2010 Gora KG, Tsokos CG, Chen YE, Srinivasan BS, Perchuk BS, Laub MT. A cell-type-specific protein-protein interaction modulates transcriptional activity of a master regulator in caulobacter crescentus Molecular Cell. 39: 455-467. PMID 20598601 DOI: 10.1016/J.Molcel.2010.06.024  0.68
2010 Rana A, Seinen E, Siudeja K, Muntendam R, Srinivasan B, van der Want JJ, Hayflick S, Reijngoud DJ, Kayser O, Sibon OC. Pantethine rescues a Drosophila model for pantothenate kinase-associated neurodegeneration. Proceedings of the National Academy of Sciences of the United States of America. 107: 6988-93. PMID 20351285 DOI: 10.1073/pnas.0912105107  0.68
2009 Flannick J, Novak A, Do CB, Srinivasan BS, Batzoglou S. Automatic parameter learning for multiple local network alignment. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1001-22. PMID 19645599 DOI: 10.1089/Cmb.2009.0099  0.68
2009 Pickrell JK, Coop G, Novembre J, Kudaravalli S, Li JZ, Absher D, Srinivasan BS, Barsh GS, Myers RM, Feldman MW, Pritchard JK. Signals of recent positive selection in a worldwide sample of human populations. Genome Research. 19: 826-37. PMID 19307593 DOI: 10.1101/Gr.087577.108  0.68
2009 Srinivasan BS, Chen J, Cheng C, Conti D, Duan S, Fridley BL, Gu X, Haines JL, Jorgenson E, Kraja A, Lasky-Su J, Li L, Rodin A, Wang D, Province M, et al. Methods for analysis in pharmacogenomics: lessons from the Pharmacogenetics Research Network Analysis Group. Pharmacogenomics. 10: 243-51. PMID 19207025 DOI: 10.2217/14622416.10.2.243  0.68
2009 Srinivasan BS, Doostzadeh J, Absalan F, Mohandessi S, Jalili R, Bigdeli S, Wang J, Mahadevan J, Lee CL, Davis RW, William Langston J, Ronaghi M. Whole genome survey of coding SNPs reveals a reproducible pathway determinant of Parkinson disease. Human Mutation. 30: 228-38. PMID 18853455 DOI: 10.1002/Humu.20840  0.68
2008 Boutte CC, Srinivasan BS, Flannick JA, Novak AF, Martens AT, Batzoglou S, Viollier PH, Crosson S. Genetic and computational identification of a conserved bacterial metabolic module. Plos Genetics. 4: e1000310. PMID 19096521 DOI: 10.1371/Journal.Pgen.1000310  0.68
2008 Flannick J, Novak A, Do CB, Srinivasan BS, Batzoglou S. Automatic parameter learning for multiple network alignment Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4955: 214-231. DOI: 10.1007/978-3-540-78839-3_19  0.68
2007 Srinivasan BS, Shah NH, Flannick JA, Abeliuk E, Novak AF, Batzoglou S. Current progress in network research: toward reference networks for key model organisms. Briefings in Bioinformatics. 8: 318-32. PMID 17728341 DOI: 10.1093/Bib/Bbm038  0.68
2007 May G, Srinivasan B, Jameson A. An improved gas-kinetic BGK finite-volume method for three-dimensional transonic flow Journal of Computational Physics. 220: 856-878. DOI: 10.1016/J.Jcp.2006.05.027  0.68
2006 Flannick J, Novak A, Srinivasan BS, McAdams HH, Batzoglou S. Graemlin: general and robust alignment of multiple large interaction networks. Genome Research. 16: 1169-81. PMID 16899655 DOI: 10.1101/Gr.5235706  0.68
2006 Srinivasan BS, Do CB, Batzoglou S. Evidence for intelligent (algorithm) design. Genome Biology. 7: 322. PMID 16879725 DOI: 10.1186/Gb-2006-7-7-322  0.68
2006 Srinivasan BS, Novak AF, Flannick JA, Batzoglou S, McAdams HH. Integrated protein interaction networks for 11 microbes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3909: 1-14.  0.68
2005 Srinivasan BS, Caberoy NB, Suen G, Taylor RG, Shah R, Tengra F, Goldman BS, Garza AG, Welch RD. Functional genome annotation through phylogenomic mapping. Nature Biotechnology. 23: 691-8. PMID 15940241 DOI: 10.1038/Nbt1098  0.68
2005 May G, Srinivasan B, Jameson A. Calculating three-dimensional transonic flow using a gas-kinetic BGK finite-volume method 43rd Aiaa Aerospace Sciences Meeting and Exhibit - Meeting Papers. 1073-1085.  0.68
2004 McAdams HH, Srinivasan B, Arkin AP. The evolution of genetic regulatory systems in bacteria. Nature Reviews. Genetics. 5: 169-78. PMID 14970819 DOI: 10.1038/Nrg1292  0.68
2004 Ramanarayanan P, Srinivasan B, Cho K, Clemens BM. "Migration energy" for impurity diffusion in crystalline solids: A closer look Journal of Applied Physics. 96: 7095-7107. DOI: 10.1063/1.1809254  0.68
2001 Yoon SS, Srinivasan B. An upwind interpolation scheme for cavitating flows on nonuniform meshes Advances in Fluid Mechanics. 29: 241-250.  0.68
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