Bo Huang - Publications

Affiliations: 
Pharmaceutical Chemistry and Biochemistry and Biophysics University of California, San Francisco, San Francisco, CA 

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Dekker J, Alber F, Aufmkolk S, Beliveau BJ, Bruneau BG, Belmont AS, Bintu L, Boettiger A, Calandrelli R, Disteche CM, Gilbert DM, Gregor T, Hansen AS, Huang B, Huangfu D, et al. Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project. Molecular Cell. PMID 37419111 DOI: 10.1016/j.molcel.2023.06.018  0.639
2021 Kumar D, Rains A, Herranz-Pérez V, Lu Q, Shi X, Swaney DL, Stevenson E, Krogan NJ, Huang B, Westlake C, Garcia-Verdugo JM, Yoder BK, Reiter JF. A ciliopathy complex builds distal appendages to initiate ciliogenesis. The Journal of Cell Biology. 220. PMID 34241634 DOI: 10.1083/jcb.202011133  0.527
2021 Shi X, Li Q, Dai Z, Tran AA, Feng S, Ramirez AD, Lin Z, Wang X, Chow TT, Chen J, Kumar D, McColloch AR, Reiter JF, Huang EJ, Seiple IB, ... Huang B, et al. Label-retention expansion microscopy. The Journal of Cell Biology. 220. PMID 34228783 DOI: 10.1083/jcb.202105067  0.599
2021 Zhao X, Garcia JQ, Tong K, Chen X, Yang B, Li Q, Dai Z, Shi X, Seiple IB, Huang B, Guo S. Polarized endosome dynamics engage cytoplasmic Par-3 that recruits dynein during asymmetric cell division. Science Advances. 7. PMID 34117063 DOI: 10.1126/sciadv.abg1244  0.544
2021 Tulpule A, Guan J, Neel DS, Allegakoen HR, Lin YP, Brown D, Chou YT, Heslin A, Chatterjee N, Perati S, Menon S, Nguyen TA, Debnath J, Ramirez AD, Shi X, ... ... Huang B, et al. Kinase-mediated RAS signaling via membraneless cytoplasmic protein granules. Cell. PMID 33848463 DOI: 10.1016/j.cell.2021.03.031  0.516
2020 Huang X, Shi X, Hansen ME, Setiady I, Nemeth CL, Celli A, Huang B, Mauro T, Koval M, Desai TA. Nanotopography Enhances Dynamic Remodeling of Tight Junction Proteins through Cytosolic Liquid Complexes. Acs Nano. PMID 32940450 DOI: 10.1021/Acsnano.0C04866  0.604
2020 Zhang J, Velmeshev D, Hashimoto K, Huang YH, Hofmann JW, Shi X, Chen J, Leidal AM, Dishart JG, Cahill MK, Kelley KW, Liddelow SA, Seeley WW, Miller BL, Walther TC, ... ... Huang B, et al. Neurotoxic microglia promote TDP-43 proteinopathy in progranulin deficiency. Nature. PMID 32866962 DOI: 10.1038/S41586-020-2709-7  0.549
2020 Shi X, Seiple I, Huang B. Applications of Label-Retention Expansion Microscopy on Biological Systems at Various Scales Biophysical Journal. 118: 150a. DOI: 10.1016/J.Bpj.2019.11.939  0.56
2019 Yang B, Chen X, Wang Y, Feng S, Pessino V, Stuurman N, Cho NH, Cheng KW, Lord SJ, Xu L, Xie D, Mullins RD, Leonetti MD, Huang B. Epi-illumination SPIM for volumetric imaging with high spatial-temporal resolution. Nature Methods. PMID 31061492 DOI: 10.1038/S41592-019-0401-3  0.326
2019 Wang Y, Yang B, Feng S, Pessino V, Huang B. Multicolor fluorescent imaging by space-constrained computational spectral imaging. Optics Express. 27: 5393-5402. PMID 30876144 DOI: 10.1364/Oe.27.005393  0.312
2019 Shi X, Garcia G, Wang Y, Reiter JF, Huang B. Deformed alignment of super-resolution images for semi-flexible structures. Plos One. 14: e0212735. PMID 30865666 DOI: 10.1371/Journal.Pone.0212735  0.637
2019 Alexander JM, Guan J, Li B, Maliskova L, Song M, Shen Y, Huang B, Lomvardas S, Weiner OD. Author response: Live-cell imaging reveals enhancer-dependent Sox2 transcription in the absence of enhancer proximity Elife. DOI: 10.7554/Elife.41769.054  0.301
2019 Shi X, Tran A, Wang X, Seiple I, Huang B. Post-Expansion Storm Enables Imaging Beyond Super-Resolution Limits Biophysical Journal. 116: 281a. DOI: 10.1016/J.Bpj.2018.11.1521  0.605
2018 Chen B, Zou W, Xu H, Liang Y, Huang B. Efficient labeling and imaging of protein-coding genes in living cells using CRISPR-Tag. Nature Communications. 9: 5065. PMID 30498221 DOI: 10.1038/S41467-018-07498-Y  0.316
2018 Chow TT, Shi X, Wei JH, Guan J, Stadler G, Huang B, Blackburn EH. Local enrichment of HP1alpha at telomeres alters their structure and regulation of telomere protection. Nature Communications. 9: 3583. PMID 30181605 DOI: 10.1038/S41467-018-05840-Y  0.567
2018 Schnitzbauer J, Wang Y, Zhao S, Bakalar M, Nuwal T, Chen B, Huang B. Correlation analysis framework for localization-based superresolution microscopy. Proceedings of the National Academy of Sciences of the United States of America. PMID 29531072 DOI: 10.1073/Pnas.1711314115  0.303
2018 Shi X, Garcia G, Reiter JF, Huang B. Two-Color 3D STORM Reveals Ciliary Transition Zone Architecture and its Role in Ciliary Signaling Biophysical Journal. 114: 547a. DOI: 10.1016/J.Bpj.2017.11.2991  0.548
2017 Shi X, Garcia G, Van De Weghe JC, McGorty R, Pazour GJ, Doherty D, Huang B, Reiter JF. Erratum: Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome. Nature Cell Biology. 19: 1379. PMID 29087383 DOI: 10.1038/ncb3622  0.516
2017 Feng S, Sekine S, Pessino V, Li H, Leonetti MD, Huang B. Improved split fluorescent proteins for endogenous protein labeling. Nature Communications. 8: 370. PMID 28851864 DOI: 10.1038/S41467-017-00494-8  0.314
2017 Shi X, Garcia Iii G, Van De Weghe JC, McGorty R, Pazour GJ, Doherty D, Huang B, Reiter JF. Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome. Nature Cell Biology. PMID 28846093 DOI: 10.1038/Ncb3599  0.563
2017 Mcgorty R, Xie D, Huang B. High-NA open-top selective-plane illumination microscopy for biological imaging. Optics Express. 25: 17798-17810. PMID 28789271 DOI: 10.1364/Oe.25.017798  0.328
2017 Pessino V, Citron YR, Feng S, Huang B. Covalent protein labeling by SpyTag-SpyCatcher in fixed cells for super-resolution microscopy. Chembiochem : a European Journal of Chemical Biology. PMID 28514494 DOI: 10.1002/Cbic.201700177  0.307
2017 Guan J, Liu H, Shi X, Feng S, Huang B. Tracking Multiple Genomic Elements Using Correlative CRISPR Imaging and Sequential DNA FISH. Biophysical Journal. 112: 1077-1084. PMID 28355536 DOI: 10.1016/J.Bpj.2017.01.032  0.615
2016 Leonetti MD, Sekine S, Kamiyama D, Weissman JS, Huang B. A scalable strategy for high-throughput GFP tagging of endogenous human proteins. Proceedings of the National Academy of Sciences of the United States of America. PMID 27274053 DOI: 10.1073/Pnas.1606731113  0.32
2016 Chen B, Guan J, Huang B. Imaging Specific Genomic DNA in Living Cells. Annual Review of Biophysics. PMID 27145877 DOI: 10.1146/Annurev-Biophys-062215-010830  0.301
2016 Kamiyama D, Sekine S, Barsi-Rhyne B, Hu J, Chen B, Gilbert LA, Ishikawa H, Leonetti MD, Marshall WF, Weissman JS, Huang B. Versatile protein tagging in cells with split fluorescent protein. Nature Communications. 7: 11046. PMID 26988139 DOI: 10.1038/Ncomms11046  0.402
2016 Chen B, Hu J, Almeida R, Liu H, Balakrishnan S, Covill-Cooke C, Lim WA, Huang B. Expanding the CRISPR imaging toolset with Staphylococcus aureus Cas9 for simultaneous imaging of multiple genomic loci. Nucleic Acids Research. PMID 26740581 DOI: 10.1093/Nar/Gkv1533  0.316
2015 Ong WQ, Citron YR, Schnitzbauer J, Kamiyama D, Huang B. Heavy water: a simple solution to increasing the brightness of fluorescent proteins in super-resolution imaging. Chemical Communications (Cambridge, England). 51: 13451-3. PMID 26226621 DOI: 10.1039/C5Cc04575D  0.32
2015 Guan J, Hu J, Chen B, Sekine S, Balakrishnan S, Huang B. Tracking Chromosome Conformation in Live Cells with CRISPR Imaging Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.2963  0.307
2015 Shi X, Garcia G, Reiter JF, Huang B. Structural Study of Ciliary Transition Zone with Multicolor 3D Storm Biophysical Journal. 108: 476a. DOI: 10.1016/J.Bpj.2014.11.2602  0.605
2014 McGorty R, Schnitzbauer J, Zhang W, Huang B. Correction of depth-dependent aberrations in 3D single-molecule localization and super-resolution microscopy Optics Letters. 39: 275-278. PMID 24562125 DOI: 10.1364/Ol.39.000275  0.315
2014 Pessino V, Ong WQ, Huang B. Quantitative Storm using Organic Dyes Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.2263  0.344
2014 Schnitzbauer J, Shi X, Kasper R, Chen B, Zhao S, Kamiyama D, Huang B. Correlation Functions Provide a Universal Framework for Quantitative Analysis of Localization-Based Super-Resolution Microscopy Images Biophysical Journal. 106: 25. DOI: 10.1016/J.Bpj.2013.11.191  0.634
2013 Puchner EM, Walter JM, Kasper R, Huang B, Lim WA. Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory. Proceedings of the National Academy of Sciences of the United States of America. 110: 16015-20. PMID 24043832 DOI: 10.1073/Pnas.1309676110  0.308
2013 Stender AS, Marchuk K, Liu C, Sander S, Meyer MW, Smith EA, Neupane B, Wang G, Li J, Cheng JX, Huang B, Fang N. Single cell optical imaging and spectroscopy. Chemical Reviews. 113: 2469-527. PMID 23410134 DOI: 10.1021/Cr300336E  0.332
2013 Puchner EM, Walter JM, Kasper R, Huang B, Lim WA. Probing Molecular Number Variability in Intracellular Structures using Photoswitchable Fluorescent Proteins Biophysical Journal. 104: 201a. DOI: 10.1016/J.Bpj.2012.11.1133  0.336
2012 Shim SH, Xia C, Zhong G, Babcock HP, Vaughan JC, Huang B, Wang X, Xu C, Bi GQ, Zhuang X. Super-resolution fluorescence imaging of organelles in live cells with photoswitchable membrane probes. Proceedings of the National Academy of Sciences of the United States of America. 109: 13978-83. PMID 22891300 DOI: 10.1073/Pnas.1201882109  0.737
2012 Zhu L, Zhang W, Elnatan D, Huang B. Faster STORM using compressed sensing Nature Methods. 9: 721-723. PMID 22522657 DOI: 10.1038/Nmeth.1978  0.321
2012 Nuwal T, Zhang W, Huang B. Super-Resolution Imaging of Membrane Topology using Small Molecule Lipophilic Dye Biophysical Journal. 102: 721a. DOI: 10.1016/J.Bpj.2011.11.3914  0.31
2011 Kasper R, Huang B. SnapShot: Light microscopy. Cell. 147: 1198.e1. PMID 22118471 DOI: 10.1016/J.Cell.2011.11.015  0.33
2011 Huang B. An in-depth view Nature Methods. 8: 304-305. PMID 21451519 DOI: 10.1038/Nmeth0411-304  0.305
2010 Huang B, Babcock H, Zhuang X. Breaking the diffraction barrier: super-resolution imaging of cells. Cell. 143: 1047-58. PMID 21168201 DOI: 10.1016/J.Cell.2010.12.002  0.546
2010 Dani A, Huang B, Bergan J, Dulac C, Zhuang X. Superresolution imaging of chemical synapses in the brain. Neuron. 68: 843-56. PMID 21144999 DOI: 10.1016/J.Neuron.2010.11.021  0.494
2010 Wu M, Huang B, Graham M, Raimondi A, Heuser JE, Zhuang X, De Camilli P. Coupling between clathrin-dependent endocytic budding and F-BAR-dependent tubulation in a cell-free system. Nature Cell Biology. 12: 902-8. PMID 20729836 DOI: 10.1038/Ncb2094  0.49
2010 Dani A, Huang B. New resolving power for light microscopy: Applications to neurobiology Current Opinion in Neurobiology. 20: 648-652. PMID 20728340 DOI: 10.1016/J.Conb.2010.07.006  0.303
2009 Huang B, Bates M, Zhuang X. Super-resolution fluorescence microscopy. Annual Review of Biochemistry. 78: 993-1016. PMID 19489737 DOI: 10.1146/Annurev.Biochem.77.061906.092014  0.571
2009 Huang B, Wu M, Wang W, Camilli PD, Zhuang X. Three-dimensional Super-resolution Fluorescence Microscopy and Its Application to Clathrin Mediated Endocytosis Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.987  0.722
2009 Jones SA, Huang B, Brandenburg B, Zhuang X. Multicolor Three-dimensional Whole-cell Imaging With Nanometer Scale Resolution Biophysical Journal. 96: 6-6. DOI: 10.1016/J.Bpj.2008.12.3365  0.577
2008 Huang B, Jones SA, Brandenburg B, Zhuang X. Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution. Nature Methods. 5: 1047-52. PMID 19029906 DOI: 10.1038/Nmeth.1274  0.564
2008 Bates M, Huang B, Zhuang X. Super-resolution microscopy by nanoscale localization of photo-switchable fluorescent probes. Current Opinion in Chemical Biology. 12: 505-14. PMID 18809508 DOI: 10.1016/J.Cbpa.2008.08.008  0.583
2008 Huang B, Wang W, Bates M, Zhuang X. Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy. Science (New York, N.Y.). 319: 810-3. PMID 18174397 DOI: 10.1126/Science.1153529  0.696
2007 Kim S, Huang B, Zare RN. Microfluidic separation and capture of analytes for single-molecule spectroscopy. Lab On a Chip. 7: 1663-5. PMID 18030384 DOI: 10.1039/B713103H  0.586
2007 Huang B, Kim S, Wu H, Zare RN. Use of a mixture of n-dodecyl-beta-D-maltoside and sodium dodecyl sulfate in poly(dimethylsiloxane) microchips to suppress adhesion and promote separation of proteins. Analytical Chemistry. 79: 9145-9. PMID 17948969 DOI: 10.1021/Ac071544N  0.574
2007 Bates M, Huang B, Dempsey GT, Zhuang X. Multicolor super-resolution imaging with photo-switchable fluorescent probes. Science (New York, N.Y.). 317: 1749-53. PMID 17702910 DOI: 10.1126/Science.1146598  0.748
2007 Whorton MR, Bokoch MP, Rasmussen SG, Huang B, Zare RN, Kobilka B, Sunahara RK. A monomeric G protein-coupled receptor isolated in a high-density lipoprotein particle efficiently activates its G protein. Proceedings of the National Academy of Sciences of the United States of America. 104: 7682-7. PMID 17452637 DOI: 10.1073/Pnas.0611448104  0.417
2007 Huang B, Yu F, Zare RN. Surface plasmon resonance imaging using a high numerical aperture microscope objective. Analytical Chemistry. 79: 2979-83. PMID 17309232 DOI: 10.1021/Ac062284X  0.466
2007 Huang B, Wu H, Bhaya D, Grossman A, Granier S, Kobilka BK, Zare RN. Counting low-copy number proteins in a single cell. Science (New York, N.Y.). 315: 81-4. PMID 17204646 DOI: 10.1126/Science.1133992  0.485
2006 Luo Y, Huang B, Wu H, Zare RN. Controlling electroosmotic flow in poly(dimethylsiloxane) separation channels by means of prepolymer additives. Analytical Chemistry. 78: 4588-92. PMID 16808469 DOI: 10.1021/Ac052274G  0.566
2006 Wu H, Huang B, Zare RN. Generation of complex, static solution gradients in microfluidic channels. Journal of the American Chemical Society. 128: 4194-5. PMID 16568971 DOI: 10.1021/Ja058530O  0.394
2006 Huang B, Wu H, Kim S, Kobilka BK, Zare RN. Phospholipid biotinylation of polydimethylsiloxane (PDMS) for protein immobilization. Lab On a Chip. 6: 369-73. PMID 16511619 DOI: 10.1039/B515840K  0.582
2005 Wu H, Huang B, Zare RN. Construction of microfluidic chips using polydimethylsiloxane for adhesive bonding. Lab On a Chip. 5: 1393-8. PMID 16286971 DOI: 10.1039/B510494G  0.383
2005 Huang B, Wu H, Kim S, Zare RN. Coating of poly(dimethylsiloxane) with n-dodecyl-beta-D-maltoside to minimize nonspecific protein adsorption. Lab On a Chip. 5: 1005-7. PMID 16175253 DOI: 10.1039/B509251E  0.552
2005 Perroud TD, Huang B, Zare RN. Effect of bin time on the photon counting histogram for one-photon excitation. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 6: 905-12. PMID 15884075 DOI: 10.1002/Cphc.200400547  0.751
2004 Huang B, Perroud TD, Zare RN. Photon counting histogram: one-photon excitation. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 5: 1523-31. PMID 15535551 DOI: 10.1002/cphc.200400176  0.762
2003 Perroud TD, Huang B, Wallace MI, Zare RN. Photon counting histogram for one-photon excitation. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 4: 1121-3. PMID 14596014 DOI: 10.1002/Cphc.200300824  0.76
2002 Whelan RJ, Wohland T, Neumann L, Huang B, Kobilka BK, Zare RN. Analysis of biomolecular interactions using a miniaturized surface plasmon resonance sensor. Analytical Chemistry. 74: 4570-6. PMID 12236371 DOI: 10.1021/Ac025669Y  0.691
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