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Dov Greenbaum, Ph.D. - Publications

Affiliations: 
Yale University, New Haven, CT 
Area:
Computational Biology and Bioinformatics
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52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Greenbaum D, Gerstein M. Resisting efficiency's overreach Riverhead Books, 2023. 256 pp. Science (New York, N.Y.). 381: 1162. PMID 37708273 DOI: 10.1126/science.adj6399  0.304
2023 Greenbaum D, Gerstein M. Calculating the future Doubleday, 2023. 352 pp. Science (New York, N.Y.). 380: 589. PMID 37167370 DOI: 10.1126/science.adh5148  0.334
2022 Greenbaum D, Gerstein M. Genomic research data and the justice system. Science (New York, N.Y.). 377: 826-827. PMID 35981024 DOI: 10.1126/science.add7974  0.421
2022 Greenbaum D, Gerstein M. The lasting legacy of John von Neumann Norton, 2022. 368 pp. Science (New York, N.Y.). 375: 983. PMID 35239371 DOI: 10.1126/science.abn7018  0.353
2021 Ash GI, Stults-Kolehmainen M, Busa MA, Gaffey AE, Angeloudis K, Muniz-Pardos B, Gregory R, Huggins RA, Redeker NS, Weinzimer SA, Grieco LA, Lyden K, Megally E, Vogiatzis I, Scher L, ... ... Greenbaum D, et al. Establishing a Global Standard for Wearable Devices in Sport and Exercise Medicine: Perspectives from Academic and Industry Stakeholders. Sports Medicine (Auckland, N.Z.). PMID 34468950 DOI: 10.1007/s40279-021-01543-5  0.657
2018 Greenbaum D, Gerstein M. What's next for humanity? Science. 362: 648-648. DOI: 10.1126/Science.Aav4297  0.442
2018 Greenbaum D, Gerstein M. Human History, Human Genomes Cell. 174: 1043-1044. DOI: 10.1016/J.Cell.2018.08.002  0.451
2017 Greenbaum D, Rozowsky J, Stodden V, Gerstein M. Structuring supplemental materials in support of reproducibility. Genome Biology. 18: 64. PMID 28381262 DOI: 10.1186/S13059-017-1205-3  0.457
2017 Greenbaum D. Legal And Ethical Implications In Genomics And Mental Health European Neuropsychopharmacology. 27: S476-S477. DOI: 10.1016/J.Euroneuro.2016.09.558  0.342
2016 Greenbaum D, Gerstein M. Who Owns Your DNA? Cell. 165: 257-258. DOI: 10.1016/J.Cell.2016.03.032  0.518
2015 Greenbaum D. Exoskeleton progress yields slippery slope. Science (New York, N.Y.). 350: 1176. PMID 26785467 DOI: 10.1126/Science.350.6265.1176-A  0.303
2015 Greenbaum D, Gerstein M. The computer connection Science. 347: 956.1-956. DOI: 10.1126/Science.Aaa0848  0.43
2015 Greenbaum D, Gerstein M. Illuminating the Genome’s Dark Matter Cell. 163: 1047-1048. DOI: 10.1016/J.Cell.2015.10.073  0.477
2014 Greenbaum D, Harmanci A, Gerstein M. Proposed social and technological solutions to issues of data privacy in personal genomics 2014 Ieee International Symposium On Ethics in Science, Technology and Engineering, Ethics 2014. DOI: 10.1109/ETHICS.2014.6893418  0.405
2013 Greenbaum D. Grand challenge: ELSI in a changing global environment. Frontiers in Genetics. 4: 158. PMID 23990842 DOI: 10.3389/Fgene.2013.00158  0.339
2013 Greenbaum D. Genomic data disclosure: time to reassess the realities. The American Journal of Bioethics : Ajob. 13: 47-50. PMID 23557049 DOI: 10.1080/15265161.2013.776134  0.339
2013 Greenbaum D, Chen J, Gerstein M. Deep inside champions, just genes? Science. 342: 560-561. DOI: 10.1126/Science.1245795  0.421
2012 Greenbaum D. Introducing personal genomics to college athletes: potentials and pitfalls. The American Journal of Bioethics : Ajob. 12: 45-7. PMID 22452478 DOI: 10.1080/15265161.2012.656811  0.329
2011 Greenbaum D, Sboner A, Mu XJ, Gerstein M. Genomics and privacy: implications of the new reality of closed data for the field. Plos Computational Biology. 7: e1002278. PMID 22144881 DOI: 10.1371/Journal.Pcbi.1002278  0.647
2011 Greenbaum D, Gerstein M. The role of cloud computing in managing the deluge of potentially private genetic data. The American Journal of Bioethics : Ajob. 11: 39-41. PMID 22047125 DOI: 10.1080/15265161.2011.608242  0.41
2011 Sboner A, Mu XJ, Greenbaum D, Auerbach RK, Gerstein MB. The real cost of sequencing: higher than you think! Genome Biology. 12: 125. PMID 21867570 DOI: 10.1186/Gb-2011-12-8-125  0.727
2011 Greenbaum D, Gerstein M. Social considerations in research: consider them but don't use them. The American Journal of Bioethics : Ajob. 11: 31-2. PMID 21534147 DOI: 10.1080/15265161.2011.562598  0.402
2011 Greenbaum D, Gerstein M. The benefits of snooping Technology Review. 114: 6.  0.312
2009 Greenbaum D, Gerstein M. Social networking and personal genomics: suggestions for optimizing the interaction. The American Journal of Bioethics : Ajob. 9: 15-9. PMID 19998104 DOI: 10.1080/15265160902894039  0.487
2009 Brown T, Murphy ER, Gerstein M, Greenbaum D. When scientific data become legal evidence Science. 324: 335-336. DOI: 10.1126/Science.324.5925.335  0.414
2009 Greenbaum D, Gerstein M. SCIENCE AND THE LAW: Grappling with the Gulf Science. 323: 210a-210a. DOI: 10.1126/Science.1167955  0.424
2009 Greenbaum D, Gerstein M. Can't run from DNA New Scientist. 203: 28-29. DOI: 10.1016/S0262-4079(09)62555-0  0.372
2008 Greenbaum D, Du J, Gerstein M. Genomic anonymity: have we already lost it? The American Journal of Bioethics : Ajob. 8: 71-4. PMID 19003717 DOI: 10.1080/15265160802478560  0.577
2007 Gerstein M, Greenbaum D, Cheung K, Miller PL. An interdepartmental Ph.D. program in computational biology and bioinformatics: the Yale perspective. Journal of Biomedical Informatics. 40: 73-9. PMID 16650809 DOI: 10.1016/J.Jbi.2006.02.008  0.414
2007 Greenbaum D, Gerstein M. Semantic web standards: Legal and social issues and implications Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences. 413-433. DOI: 10.1007/978-0-387-48438-9_19  0.331
2005 Smith A, Greenbaum D, Douglas SM, Long M, Gerstein M. Network security and data integrity in academia: an assessment and a proposal for large-scale archiving. Genome Biology. 6: 119. PMID 16168090 DOI: 10.1186/Gb-2005-6-9-119  0.383
2005 Greenbaum D, Smith A, Gerstein M. Impediments to database interoperation: legal issues and security concerns. Nucleic Acids Research. 33: D3-4. PMID 15608202 DOI: 10.1093/Nar/Gki134  0.419
2004 Edwards AM, Kus B, Jansen R, Greenbaum D, Greenblatt J, Gerstein M. Bridging structural biology and genomics: assessing protein interaction data with known complexes. Drug Discovery Today. 9: S32-40. PMID 23573642  0.638
2004 Xia Y, Yu H, Jansen R, Seringhaus M, Baxter S, Greenbaum D, Zhao H, Gerstein M. Analyzing cellular biochemistry in terms of molecular networks. Annual Review of Biochemistry. 73: 1051-87. PMID 15189167 DOI: 10.1146/Annurev.Biochem.73.011303.073950  0.732
2004 Greenbaum D, Douglas SM, Smith A, Lim J, Fischer M, Schultz M, Gerstein M. Computer security in academia-a potential roadblock to distributed annotation of the human genome. Nature Biotechnology. 22: 771-2. PMID 15175700 DOI: 10.1038/Nbt0604-771  0.467
2004 Yu H, Greenbaum D, Xin Lu H, Zhu X, Gerstein M. Genomic analysis of essentiality within protein networks. Trends in Genetics : Tig. 20: 227-31. PMID 15145574 DOI: 10.1016/J.Tig.2004.04.008  0.666
2004 Yu H, Zhu X, Greenbaum D, Karro J, Gerstein M. TopNet: a tool for comparing biological sub-networks, correlating protein properties with topological statistics. Nucleic Acids Research. 32: 328-37. PMID 14724320 DOI: 10.1093/Nar/Gkh164  0.662
2003 Jansen R, Yu H, Greenbaum D, Kluger Y, Krogan NJ, Chung S, Emili A, Snyder M, Greenblatt JF, Gerstein M. A Bayesian networks approach for predicting protein-protein interactions from genomic data. Science (New York, N.Y.). 302: 449-53. PMID 14564010 DOI: 10.1126/Science.1087361  0.731
2003 Greenbaum D, Colangelo C, Williams K, Gerstein M. Comparing protein abundance and mRNA expression levels on a genomic scale. Genome Biology. 4: 117. PMID 12952525 DOI: 10.1186/Gb-2003-4-9-117  0.469
2003 Greenbaum D, Gerstein M. A universal legal framework as a prerequisite for database interoperability. Nature Biotechnology. 21: 979-82. PMID 12949555 DOI: 10.1038/Nbt0903-979  0.443
2003 Greenbaum D, Lim J, Gerstein M. An analysis of the present system of scientific publishing: What's wrong and where to go from here Interdisciplinary Science Reviews. 28: 293-302. DOI: 10.1179/030801803225005238  0.449
2002 Lin J, Qian J, Greenbaum D, Bertone P, Das R, Echols N, Senes A, Stenger B, Gerstein M. GeneCensus: genome comparisons in terms of metabolic pathway activity and protein family sharing. Nucleic Acids Research. 30: 4574-82. PMID 12384605 DOI: 10.1093/Nar/Gkf555  0.728
2002 Lian Z, Kluger Y, Greenbaum DS, Tuck D, Gerstein M, Berliner N, Weissman SM, Newburger PE. Genomic and proteomic analysis of the myeloid differentiation program: global analysis of gene expression during induced differentiation in the MPRO cell line. Blood. 100: 3209-20. PMID 12384419 DOI: 10.1182/Blood-2002-03-0850  0.398
2002 Edwards AM, Kus B, Jansen R, Greenbaum D, Greenblatt J, Gerstein M. Bridging structural biology and genomics: assessing protein interaction data with known complexes. Trends in Genetics : Tig. 18: 529-36. PMID 12350343 DOI: 10.1016/S0168-9525(02)02763-4  0.664
2002 Greenbaum D, Jansen R, Gerstein M. Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts. Bioinformatics (Oxford, England). 18: 585-96. PMID 12016056 DOI: 10.1093/Bioinformatics/18.4.585  0.651
2002 Hegyi H, Lin J, Greenbaum D, Gerstein M. Structural genomics analysis: characteristics of atypical, common, and horizontally transferred folds. Proteins. 47: 126-41. PMID 11933060 DOI: 10.1002/Prot.10078  0.503
2002 Jansen R, Greenbaum D, Gerstein M. Relating whole-genome expression data with protein-protein interactions. Genome Research. 12: 37-46. PMID 11779829 DOI: 10.1101/Gr.205602  0.632
2001 Das R, Junker J, Greenbaum D, Gerstein MB. Global perspectives on proteins: comparing genomes in terms of folds, pathways and beyond. The Pharmacogenomics Journal. 1: 115-25. PMID 11911438 DOI: 10.1038/Sj.Tpj.6500021  0.648
2001 Luscombe NM, Greenbaum D, Gerstein M. What is bioinformatics? A proposed definition and overview of the field. Methods of Information in Medicine. 40: 346-58. PMID 11552348  0.326
2001 Greenbaum D, Luscombe NM, Jansen R, Qian J, Gerstein M. Interrelating different types of genomic data, from proteome to secretome: 'oming in on function. Genome Research. 11: 1463-8. PMID 11544189 DOI: 10.1101/Gr.207401  0.666
2001 Luscombe N, Greenbaum D, Gerstein M. What is bioinformatics? An introduction and overview Yearbook of Medical Informatics. 10: 83-100. DOI: 10.1055/S-0038-1638103  0.503
2001 Luscombe NM, Greenbaum D, Gerstein M. What is Bioinformatics? A Proposed Definition and Overview of the Field Methods of Information in Medicine. 40: 346-358. DOI: 10.1055/S-0038-1634431  0.558
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