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Guergana K. Savova, Ph.D. - Publications

Affiliations: 
2003 University of Minnesota, Twin Cities, Minneapolis, MN 
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47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Miller T, Bethard S, Dligach D, Savova G. End-to-end clinical temporal information extraction with multi-head attention. Proceedings of the Conference. Association For Computational Linguistics. Meeting. 2023: 313-319. PMID 37780680  0.719
2023 Zhou W, Yetisgen M, Afshar M, Gao Y, Savova G, Miller TA. Improving model transferability for clinical note section classification models using continued pretraining. Journal of the American Medical Informatics Association : Jamia. PMID 37725927 DOI: 10.1093/jamia/ocad190  0.489
2023 Chen S, Kann BH, Foote MB, Aerts HJWL, Savova GK, Mak RH, Bitterman DS. Use of Artificial Intelligence Chatbots for Cancer Treatment Information. Jama Oncology. PMID 37615976 DOI: 10.1001/jamaoncol.2023.2954  0.738
2023 Chen S, Guevara M, Ramirez N, Murray A, Warner JL, Aerts HJWL, Miller TA, Savova GK, Mak RH, Bitterman DS. Natural Language Processing to Automatically Extract the Presence and Severity of Esophagitis in Notes of Patients Undergoing Radiotherapy. Jco Clinical Cancer Informatics. 7: e2300048. PMID 37506330 DOI: 10.1200/CCI.23.00048  0.767
2023 Derton A, Guevara M, Chen S, Moningi S, Kozono DE, Liu D, Miller TA, Savova GK, Mak RH, Bitterman DS. Natural Language Processing Methods to Empirically Explore Social Contexts and Needs in Cancer Patient Notes. Jco Clinical Cancer Informatics. 7: e2200196. PMID 37235847 DOI: 10.1200/CCI.22.00196  0.757
2023 Zhou W, Yetisgen M, Afshar M, Gao Y, Savova G, Miller TA. Improving Model Transferability for Clinical Note Section Classification Models Using Continued Pretraining. Medrxiv : the Preprint Server For Health Sciences. PMID 37162963 DOI: 10.1101/2023.04.15.23288628  0.489
2023 Bitterman DS, Goldner E, Finan S, Harris D, Durbin EB, Hochheiser H, Warner JL, Mak RH, Miller T, Savova GK. An end-to-end natural language processing system for automatically extracting radiotherapy events from clinical texts: NLP to extract radiotherapy events from text. International Journal of Radiation Oncology, Biology, Physics. PMID 36990288 DOI: 10.1016/j.ijrobp.2023.03.055  0.782
2021 Zhang J, Can A, Lai PMR, Mukundan S, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Geometric Features Associated with Middle Cerebral Artery Bifurcation Aneurysm Formation: A Matched Case-Control Study. Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association. 31: 106268. PMID 34974241 DOI: 10.1016/j.jstrokecerebrovasdis.2021.106268  0.644
2021 Zhang J, Lai PMR, Can A, Mukundan S, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Tobacco use and age are associated with different morphologic features of anterior communicating artery aneurysms. Scientific Reports. 11: 4791. PMID 33637879 DOI: 10.1038/s41598-021-84315-5  0.664
2021 Bitterman DS, Miller TA, Mak RH, Savova GK. Clinical natural language processing for radiation oncology: A review and practical primer. International Journal of Radiation Oncology, Biology, Physics. PMID 33545300 DOI: 10.1016/j.ijrobp.2021.01.044  0.776
2021 Zhang J, Can A, Lai PMR, Mukundan S, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Morphological variables associated with ruptured basilar tip aneurysms. Scientific Reports. 11: 2526. PMID 33510194 DOI: 10.1038/s41598-021-81364-8  0.651
2021 Zhang J, Can A, Lai PMR, Mukundan S, Castro VM, Dligach D, Finan S, Gainer V, Shadick N, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Geometric variations associated with posterior communicating artery aneurysms. Journal of Neurointerventional Surgery. PMID 33479035 DOI: 10.1136/neurintsurg-2020-017062  0.637
2020 Zhang J, Can A, Rosalind Lai PM, Mukundan S, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Vascular geometry associated with anterior communicating artery aneurysm formation. World Neurosurgery. PMID 33307259 DOI: 10.1016/j.wneu.2020.11.160  0.641
2020 Zhang J, Can A, Lai PMR, Mukundan S, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Surrounding vascular geometry associated with basilar tip aneurysm formation. Scientific Reports. 10: 17928. PMID 33087795 DOI: 10.1038/s41598-020-74266-8  0.652
2020 Zhang J, Can A, Lai PMR, Mukundan S, Castro VM, Dligach D, Finan S, Yu S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R. Age and morphology of posterior communicating artery aneurysms. Scientific Reports. 10: 11545. PMID 32665589 DOI: 10.1038/S41598-020-68276-9  0.657
2020 Yuan Z, Finan S, Warner J, Savova G, Hochheiser H. Interactive Exploration of Longitudinal Cancer Patient Histories Extracted From Clinical Text. Jco Clinical Cancer Informatics. 4: 412-420. PMID 32383981 DOI: 10.1200/CCI.19.00115  0.308
2020 Lin C, Bethard S, Dligach D, Sadeque F, Savova G, Miller TA. Does BERT need domain adaptation for clinical negation detection? Journal of the American Medical Informatics Association : Jamia. PMID 32044989 DOI: 10.1093/Jamia/Ocaa001  0.693
2019 Savova GK, Danciu I, Alamudun F, Miller T, Lin C, Bitterman DS, Tourassi G, Warner JL. Use of Natural Language Processing to Extract Clinical Cancer Phenotypes from Electronic Medical Records. Cancer Research. PMID 31395609 DOI: 10.1158/0008-5472.Can-19-0579  0.792
2019 Viani N, Miller TA, Napolitano C, Priori SG, Savova GK, Bellazzi R, Sacchi L. Supervised methods to extract clinical events from cardiology reports in Italian. Journal of Biomedical Informatics. 103219. PMID 31150777 DOI: 10.1016/j.jbi.2019.103219  0.527
2019 Can A, Lai PMR, Castro VM, Yu S, Dligach D, Finan S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Decreased Total Iron Binding Capacity May Correlate with Ruptured Intracranial Aneurysms. Scientific Reports. 9: 6054. PMID 30988354 DOI: 10.1038/S41598-019-42622-Y  0.624
2018 Can A, Castro VM, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Elevated International Normalized Ratio Is Associated With Ruptured Aneurysms. Stroke. 49: 2046-2052. PMID 30354989 DOI: 10.1161/Strokeaha.118.022412  0.647
2018 Can A, Rudy RF, Castro VM, Yu S, Dligach D, Finan S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Association between aspirin dose and subarachnoid hemorrhage from saccular aneurysms: A case-control study. Neurology. PMID 30135253 DOI: 10.1212/Wnl.0000000000006200  0.63
2018 Zhang J, Can A, Mukundan S, Steigner M, Castro VM, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Wang Z, Weiss ST, et al. Morphological Variables Associated With Ruptured Middle Cerebral Artery Aneurysms. Neurosurgery. PMID 29850834 DOI: 10.1093/Neuros/Nyy213  0.646
2018 Can A, Rudy RF, Castro VM, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Low Serum Calcium and Magnesium Levels and Rupture of Intracranial Aneurysms. Stroke. PMID 29844027 DOI: 10.1161/Strokeaha.118.020963  0.608
2018 Can A, Castro VM, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Lipid-Lowering Agents and High HDL (High-Density Lipoprotein) Are Inversely Associated With Intracranial Aneurysm Rupture. Stroke. PMID 29622625 DOI: 10.1161/Strokeaha.117.019972  0.624
2018 Can A, Castro VM, Yu S, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Antihyperglycemic Agents Are Inversely Associated With Intracranial Aneurysm Rupture. Stroke. 49: 34-39. PMID 29203688 DOI: 10.1161/Strokeaha.117.019249  0.638
2017 Can A, Castro VM, Ozdemir YH, Dagen S, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Heroin Use Is Associated with Ruptured Saccular Aneurysms. Translational Stroke Research. PMID 29103103 DOI: 10.1007/S12975-017-0582-Y  0.647
2017 Savova GK, Tseytlin E, Finan S, Castine M, Miller T, Medvedeva O, Harris D, Hochheiser H, Lin C, Chavan G, Jacobson RS. DeepPhe: A Natural Language Processing System for Extracting Cancer Phenotypes from Clinical Records. Cancer Research. 77: e115-e118. PMID 29092954 DOI: 10.1158/0008-5472.Can-17-0615  0.494
2017 Can A, Castro VM, Ozdemir YH, Dagen S, Yu S, Dligach D, Finan S, Gainer V, Shadick NA, Murphy S, Cai T, Savova G, Dammers R, Weiss ST, Du R. Association of intracranial aneurysm rupture with smoking duration, intensity, and cessation. Neurology. PMID 28855408 DOI: 10.1212/Wnl.0000000000004419  0.598
2017 Can A, Castro VM, Ozdemir YH, Dagen S, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R. Alcohol Consumption and Aneurysmal Subarachnoid Hemorrhage. Translational Stroke Research. PMID 28752411 DOI: 10.1007/S12975-017-0557-Z  0.616
2017 Miller T, Dligach D, Bethard S, Lin C, Savova G. Towards Generalizable Entity-Centric Clinical Coreference Resolution. Journal of Biomedical Informatics. PMID 28438706 DOI: 10.1016/J.Jbi.2017.04.015  0.688
2016 Castro VM, Dligach D, Finan S, Yu S, Can A, Abd-El-Barr M, Gainer V, Shadick NA, Murphy S, Cai T, Savova G, Weiss ST, Du R. Large-scale identification of patients with cerebral aneurysms using natural language processing. Neurology. PMID 27927935 DOI: 10.1212/Wnl.0000000000003490  0.677
2015 Dligach D, Miller T, Savova GK. Semi-supervised Learning for Phenotyping Tasks. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2015: 502-11. PMID 26958183  0.646
2015 Lin C, Dligach D, Miller TA, Bethard S, Savova GK. Multilayered temporal modeling for the clinical domain. Journal of the American Medical Informatics Association : Jamia. PMID 26521301 DOI: 10.1093/Jamia/Ocv113  0.693
2015 Lin C, Karlson EW, Dligach D, Ramirez MP, Miller TA, Mo H, Braggs NS, Cagan A, Gainer V, Denny JC, Savova GK. Automatic identification of methotrexate-induced liver toxicity in patients with rheumatoid arthritis from the electronic medical record. Journal of the American Medical Informatics Association : Jamia. 22: e151-61. PMID 25344930 DOI: 10.1136/Amiajnl-2014-002642  0.702
2014 Styler WF, Bethard S, Finan S, Palmer M, Pradhan S, de Groen PC, Erickson B, Miller T, Lin C, Savova G, Pustejovsky J. Temporal Annotation in the Clinical Domain. Transactions of the Association For Computational Linguistics. 2: 143-154. PMID 29082229 DOI: 10.1162/Tacl_A_00172  0.651
2014 Carrell DS, Halgrim S, Tran DT, Buist DS, Chubak J, Chapman WW, Savova G. Carrell et al. respond to "Observational research and the EHR". American Journal of Epidemiology. 179: 762-3. PMID 24488509 DOI: 10.1093/Aje/Kwt444  0.322
2014 Dligach D, Bethard S, Becker L, Miller T, Savova GK. Discovering body site and severity modifiers in clinical texts. Journal of the American Medical Informatics Association : Jamia. 21: 448-54. PMID 24091648 DOI: 10.1136/Amiajnl-2013-001766  0.681
2013 Pathak J, Bailey KR, Beebe CE, Bethard S, Carrell DC, Chen PJ, Dligach D, Endle CM, Hart LA, Haug PJ, Huff SM, Kaggal VC, Li D, Liu H, Marchant K, ... ... Savova GK, et al. Normalization and standardization of electronic health records for high-throughput phenotyping: the SHARPn consortium. Journal of the American Medical Informatics Association : Jamia. 20: e341-8. PMID 24190931 DOI: 10.1136/Amiajnl-2013-001939  0.775
2013 Lin C, Karlson EW, Canhao H, Miller TA, Dligach D, Chen PJ, Perez RN, Shen Y, Weinblatt ME, Shadick NA, Plenge RM, Savova GK. Automatic prediction of rheumatoid arthritis disease activity from the electronic medical records. Plos One. 8: e69932. PMID 23976944 DOI: 10.1371/journal.pone.0069932  0.718
2013 Albright D, Lanfranchi A, Fredriksen A, Styler WF, Warner C, Hwang JD, Choi JD, Dligach D, Nielsen RD, Martin J, Ward W, Palmer M, Savova GK. Towards comprehensive syntactic and semantic annotations of the clinical narrative. Journal of the American Medical Informatics Association : Jamia. 20: 922-30. PMID 23355458 DOI: 10.1136/Amiajnl-2012-001317  0.743
2013 Wu ST, Kaggal VC, Dligach D, Masanz JJ, Chen P, Becker L, Chapman WW, Savova GK, Liu H, Chute CG. A common type system for clinical natural language processing. Journal of Biomedical Semantics. 4: 1. PMID 23286462 DOI: 10.1186/2041-1480-4-1  0.685
2012 Zheng J, Chapman WW, Miller TA, Lin C, Crowley RS, Savova GK. A system for coreference resolution for the clinical narrative. Journal of the American Medical Informatics Association : Jamia. 19: 660-7. PMID 22298565 DOI: 10.1136/Amiajnl-2011-000599  0.446
2011 Cairns BL, Nielsen RD, Masanz JJ, Martin JH, Palmer MS, Ward WH, Savova GK. The MiPACQ clinical question answering system. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2011: 171-80. PMID 22195068  0.561
2010 Savova GK, Masanz JJ, Ogren PV, Zheng J, Sohn S, Kipper-Schuler KC, Chute CG. Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. Journal of the American Medical Informatics Association : Jamia. 17: 507-13. PMID 20819853 DOI: 10.1136/Jamia.2009.001560  0.302
2009 Savova G, Bethard S, Styler W, Martin J, Palmer M, Masanz J, Ward W. Towards temporal relation discovery from the clinical narrative. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2009: 568-72. PMID 20351919  0.594
2003 Savova GK, Harris M, Johnson T, Pakhomov SV, Chute CG. A data-driven approach for extracting "the most specific term" for ontology development. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 579-83. PMID 14728239  0.518
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