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Daniel A. Pomeranz Krummel, Ph.D. - Publications

Affiliations: 
2000 Yale University, New Haven, CT 
Area:
Biochemistry
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10/31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 McCarthy P, Garside E, Meschede-Krasa Y, MacMillan A, Pomeranz Krummel D. Reversibly constraining spliceosome-substrate complexes by engineering disulfide crosslinks. Methods (San Diego, Calif.). PMID 28648680 DOI: 10.1016/J.Ymeth.2017.06.022  0.343
2014 Pomeranz Krummel DA, MacMillan AM. It takes two to tangle: Prp24 and spliceosome assembly. Nature Structural & Molecular Biology. 21: 503-4. PMID 24896810 DOI: 10.1038/Nsmb.2838  0.321
2012 van der Feltz C, Anthony K, Brilot A, Pomeranz Krummel DA. Architecture of the spliceosome. Biochemistry. 51: 3321-33. PMID 22471593 DOI: 10.1021/Bi201215R  0.354
2009 Pomeranz Krummel DA, Oubridge C, Leung AK, Li J, Nagai K. Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution. Nature. 458: 475-80. PMID 19325628 DOI: 10.1038/nature07851  0.414
2007 Obayashi E, Oubridge C, Pomeranz Krummel D, Nagai K. Crystallization of RNA-protein complexes. Methods in Molecular Biology (Clifton, N.J.). 363: 259-76. PMID 17272846 DOI: 10.1007/978-1-59745-209-0_13  0.505
2004 Muto Y, Pomeranz Krummel D, Oubridge C, Hernandez H, Robinson CV, Neuhaus D, Nagai K. The structure and biochemical properties of the human spliceosomal protein U1C. Journal of Molecular Biology. 341: 185-98. PMID 15312772 DOI: 10.1016/j.jmb.2004.04.078  0.401
2001 Nagai K, Muto Y, Pomeranz Krummel DA, Kambach C, Ignjatovic T, Walke S, Kuglstatter A. Structure and assembly of the spliceosomal snRNPs. Novartis Medal Lecture. Biochemical Society Transactions. 29: 15-26. PMID 11356120 DOI: 10.1042/0300-5127:0290015  0.364
2000 Pomeranz Krummel DA, Kent O, MacMillan AM, Altman S. Evidence for helical unwinding of an RNA substrate by the RNA enzyme RNase P: use of an interstrand disulfide crosslink in substrate. Journal of Molecular Biology. 295: 1113-8. PMID 10653690 DOI: 10.1006/Jmbi.1999.3424  0.457
1999 Pomeranz Krummel DA, Altman S. Verification of phylogenetic predictions in vivo and the importance of the tetraloop motif in a catalytic RNA. Proceedings of the National Academy of Sciences of the United States of America. 96: 11200-5. PMID 10500154 DOI: 10.1073/Pnas.96.20.11200  0.517
1999 Pomeranz Krummel DA, Altman S. Multiple binding modes of substrate to the catalytic RNA subunit of RNase P from Escherichia coli. Rna (New York, N.Y.). 5: 1021-33. PMID 10445877 DOI: 10.1017/S1355838299990416  0.496
Low-probability matches (unlikely to be authored by this person)
2012 Pugh TJ, Weeraratne SD, Archer TC, Pomeranz Krummel DA, Auclair D, Bochicchio J, Carneiro MO, Carter SL, Cibulskis K, Erlich RL, Greulich H, Lawrence MS, Lennon NJ, McKenna A, Meldrim J, et al. Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations. Nature. 488: 106-10. PMID 22820256 DOI: 10.1038/Nature11329  0.176
2016 van der Feltz C, Pomeranz Krummel D. Purification of Native Complexes for Structural Study Using a Tandem Affinity Tag Method. Journal of Visualized Experiments : Jove. PMID 27501074 DOI: 10.3791/54389  0.162
2014 Anthony KC, You C, Piehler J, Pomeranz Krummel DA. High-affinity gold nanoparticle pin to label and localize histidine-tagged protein in macromolecular assemblies. Structure (London, England : 1993). 22: 628-35. PMID 24560806 DOI: 10.1016/j.str.2014.01.007  0.147
2017 Sengupta S, Pomeranz Krummel D, Pomeroy S. The evolution of medulloblastoma therapy to personalized medicine. F1000research. 6: 490. PMID 28713553 DOI: 10.12688/F1000Research.10859.1  0.111
2016 Anthony KC, You C, Piehler J, Pomeranz Krummel DA. High-affinity gold nanoparticle pin to label and localize histidine-tagged protein in macromolecular assemblies. Structure (London, England : 1993). 23: 1558. PMID 26468551 DOI: 10.1016/j.str.2015.07.006  0.079
2017 Da Veiga Beltrame E, Tyrwhitt-Drake J, Roy I, Shalaby R, Suckale J, Pomeranz Krummel D. 3D Printing of Biomolecular Models for Research and Pedagogy. Journal of Visualized Experiments : Jove. PMID 28362403 DOI: 10.3791/55427  0.073
2023 Lechpammer M, Mahammedi A, Pomeranz Krummel DA, Sengupta S. Lessons learned from evolving frameworks in adult glioblastoma. Handbook of Clinical Neurology. 192: 131-140. PMID 36796938 DOI: 10.1016/B978-0-323-85538-9.00011-0  0.07
2023 Bhattacharya D, Barille R, Toukam DK, Gawali VS, Kallay L, Ahmed T, Brown H, Rezvanian S, Karve A, Desai PB, Medvedovic M, Wang K, Ionascu D, Harun N, Wang C, ... ... Pomeranz Krummel DA, et al. GABA(A) receptor activation drives GABARAP-Nix mediated autophagy to radiation-sensitize primary and brain-metastatic lung adenocarcinoma tumors. Biorxiv : the Preprint Server For Biology. PMID 38076805 DOI: 10.1101/2023.11.29.569295  0.061
2006 Thompson C, Pomeranz Krummel DA, Jacobsen H, Nagai K, Cooke A. Identification of nuclear spliceosomal antigens targeted by NOD mouse antibodies following sodium iodide intake. Autoimmunity. 39: 99-106. PMID 16698665 DOI: 10.1080/08916930600597276  0.053
2023 Hey G, Rao R, Carter A, Reddy A, Valle D, Patel A, Patel D, Lucke-Wold B, Pomeranz Krummel D, Sengupta S. Ligand-Gated Ion Channels: Prognostic and Therapeutic Implications for Gliomas. Journal of Personalized Medicine. 13. PMID 37241023 DOI: 10.3390/jpm13050853  0.052
2019 Kallay L, Keskin H, Ross A, Rupji M, Moody OA, Wang X, Li G, Ahmed T, Rashid F, Stephen MR, Cottrill KA, Nuckols TA, Xu M, Martinson DE, Tranghese F, ... ... Pomeranz Krummel DA, et al. Modulating native GABA receptors in medulloblastoma with positive allosteric benzodiazepine-derivatives induces cell death. Journal of Neuro-Oncology. PMID 30725256 DOI: 10.1007/S11060-019-03115-0  0.048
2022 Lechpammer M, Rao R, Shah S, Mirheydari M, Bhattacharya D, Koehler A, Toukam DK, Haworth KJ, Pomeranz Krummel D, Sengupta S. Advances in Immunotherapy for the Treatment of Adult Glioblastoma: Overcoming Chemical and Physical Barriers. Cancers. 14. PMID 35406398 DOI: 10.3390/cancers14071627  0.047
2021 Koehler A, Karve A, Desai P, Arbiser J, Plas DR, Qi X, Read RD, Sasaki AT, Gawali VS, Toukam DK, Bhattacharya D, Kallay L, Pomeranz Krummel DA, Sengupta S. Reuse of Molecules for Glioblastoma Therapy. Pharmaceuticals (Basel, Switzerland). 14. PMID 33525329 DOI: 10.3390/ph14020099  0.043
2023 Rao R, Patel A, Hanchate K, Robinson E, Edwards A, Shah S, Higgins D, Haworth KJ, Lucke-Wold B, Pomeranz Krummel D, Sengupta S. Advances in Focused Ultrasound for the Treatment of Brain Tumors. Tomography (Ann Arbor, Mich.). 9: 1094-1109. PMID 37368542 DOI: 10.3390/tomography9030090  0.036
2022 Rao R, Shah S, Bhattacharya D, Toukam DK, Cáceres R, Pomeranz Krummel DA, Sengupta S. Ligand-Gated Ion Channels as Targets for Treatment and Management of Cancers. Frontiers in Physiology. 13: 839437. PMID 35350689 DOI: 10.3389/fphys.2022.839437  0.035
2018 Clark AR, Calligaris D, Regan MS, Pomeranz Krummel D, Agar JN, Kallay L, MacDonald T, Schniederjan M, Santagata S, Pomeroy SL, Agar NYR, Sengupta S. Rapid discrimination of pediatric brain tumors by mass spectrometry imaging. Journal of Neuro-Oncology. PMID 30128689 DOI: 10.1007/S11060-018-2978-2  0.031
2020 Bhattacharya D, Pomeroy SL, Pomeranz Krummel DA, Sengupta S. Epigenetics and survivorship in pediatric brain tumor patients. Journal of Neuro-Oncology. PMID 32451770 DOI: 10.1007/S11060-020-03535-3  0.028
2020 Pomeranz Krummel DA, Nasti TH, Izar B, Press RH, Xu M, Lowder L, Kallay L, Rupji M, Rosen H, Su J, Curran W, Olson J, Weinberg B, Schniederjan M, Neill S, et al. Impact of Sequencing Radiation Therapy and Immune Checkpoint Inhibitors in the Treatment of Melanoma Brain Metastases. International Journal of Radiation Oncology, Biology, Physics. PMID 32057994 DOI: 10.1016/J.Ijrobp.2020.01.043  0.026
2023 Kallay L, Gawali VS, Toukam DK, Bhattacharya D, Jenkins A, Sengupta S, Pomeranz Krummel DA. Screening Ion Channels in Cancer Cells. Journal of Visualized Experiments : Jove. PMID 37395566 DOI: 10.3791/65427  0.024
2005 Thompson C, Jacobsen H, Pomeranz Krummel D, Nagai K, Cooke A. Non-depleting anti-CD4 antibody not only prevents onset but resolves sialadenitis in NOD mice. Autoimmunity. 37: 549-54. PMID 15763917 DOI: 10.1080/08916930400021352  0.023
2020 Pomeranz Krummel DA, Nasti TH, Kaluzova M, Kallay L, Bhattacharya D, Melms JC, Izar B, Xu M, Burnham A, Ahmed T, Li G, Lawson D, Kowalski J, Cao Y, Switchenko JM, et al. Melanoma Cell Intrinsic GABA Receptor Enhancement Potentiates Radiation and Immune Checkpoint Inhibitor Response by Promoting Direct and T Cell-Mediated Antitumor Activity. International Journal of Radiation Oncology, Biology, Physics. PMID 33289666 DOI: 10.1016/j.ijrobp.2020.10.025  0.021
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