Rumit Maini, Ph.D. - Related publications

Affiliations: 
2013 Chemistry Arizona State University, Tempe, AZ, United States 
Area:
Natural products, Bleomycin
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Lilleorg S, Reier K, Volõnkin P, Remme J, Liiv A. Phenotypic effects of paralogous ribosomal proteins bL31A and bL31B in E. coli. Scientific Reports. 10: 11682. PMID 32669635 DOI: 10.1038/s41598-020-68582-2   
2020 Ding W, Zhao H, Chen Y, Zhang B, Yang Y, Zang J, Wu J, Lin S. Chimeric design of pyrrolysyl-tRNA synthetase/tRNA pairs and canonical synthetase/tRNA pairs for genetic code expansion. Nature Communications. 11: 3154. PMID 32572025 DOI: 10.1038/s41467-020-16898-y   
2020 Hibi K, Amikura K, Sugiura N, Masuda K, Ohno S, Yokogawa T, Ueda T, Shimizu Y. Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs. Communications Biology. 3: 350. PMID 32620935 DOI: 10.1038/s42003-020-1074-2   
2020 Koehler C, Estrada Girona G, Reinkemeier CD, Lemke EA. Inducible Genetic Code Expansion in Eukaryotes. Chembiochem : a European Journal of Chemical Biology. PMID 32598534 DOI: 10.1002/cbic.202000338   
2020 Chen H, Ercanbrack C, Wang T, Gan Q, Fan C. A Synthetic Reporter for Probing Mistranslation in Living Cells. Frontiers in Bioengineering and Biotechnology. 8: 623. PMID 32671035 DOI: 10.3389/fbioe.2020.00623   
2020 Kong J, Kim S. Cell-based analysis of pairwise interactions between the components of the multi-tRNA synthetase complex. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 32539228 DOI: 10.1096/fj.202000418R   
2020 Scopino K, Williams E, Elsayed A, Barr WA, Krizanc D, Thayer KM, Weir MP. A Ribosome Interaction Surface Sensitive to mRNA GCN Periodicity. Biomolecules. 10. PMID 32503152 DOI: 10.3390/biom10060849   
2020 Scopino K, Williams E, Elsayed A, Barr WA, Krizanc D, Thayer KM, Weir MP. A Ribosome Interaction Surface Sensitive to mRNA GCN Periodicity. Biomolecules. 10. PMID 32503152 DOI: 10.3390/biom10060849   
2020 Zhang C, Yashiro Y, Sakaguchi Y, Suzuki T, Tomita K. Substrate specificities of Escherichia coli ItaT that acetylates aminoacyl-tRNAs. Nucleic Acids Research. PMID 32501503 DOI: 10.1093/nar/gkaa487   
2020 Tüting C, Iacobucci C, Ihling CH, Kastritis PL, Sinz A. Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity. Scientific Reports. 10: 12618. PMID 32724211 DOI: 10.1038/s41598-020-69313-3   
2020 Manole A, Efthymiou S, O'Connor E, Mendes MI, Jennings M, Maroofian R, Davagnanam I, Mankad K, Lopez MR, Salpietro V, Harripaul R, Badalato L, Walia J, Francklyn CS, Athanasiou-Fragkouli A, ... , et al. De Novo and Bi-allelic Pathogenic Variants in NARS1 Cause Neurodevelopmental Delay Due to Toxic Gain-of-Function and Partial Loss-of-Function Effects. American Journal of Human Genetics. PMID 32738225 DOI: 10.1016/j.ajhg.2020.06.016   
2020 Demongeot J, Seligmann H. Theoretical minimal RNA rings mimick molecular evolution before tRNA-mediated translation: codon-amino acid affinities increase from early to late RNA rings. Comptes Rendus Biologies. 343: 111-122. PMID 32720493 DOI: 10.5802/crbiol.1   
2020 Kimura S, Srisuknimit V, Waldor MK. Probing the diversity and regulation of tRNA modifications. Current Opinion in Microbiology. 57: 41-48. PMID 32663792 DOI: 10.1016/j.mib.2020.06.005   
2020 Kimura S, Srisuknimit V, Waldor MK. Probing the diversity and regulation of tRNA modifications. Current Opinion in Microbiology. 57: 41-48. PMID 32663792 DOI: 10.1016/j.mib.2020.06.005   
2020 Beyer J, Hosseinzadeh P, Gottfried-Lee I, Van Fossen EM, Zhu P, Bednar RM, Karplus PA, Mehl RA, Cooley RB. Overcoming near-cognate suppression in a Release Factor 1-deficient host with an improved nitro-tyrosine tRNA synthetase. Journal of Molecular Biology. PMID 32569745 DOI: 10.1016/j.jmb.2020.06.014   
2020 Yakobov N, Fischer F, Mahmoudi N, Saga Y, Grube CD, Roy H, Senger B, Grob G, Tatematsu S, Yokokawa D, Mouyna I, Latgé JP, Nakajima H, Kushiro T, Becker HD. RNA-dependent sterol aspartylation in fungi. Proceedings of the National Academy of Sciences of the United States of America. PMID 32541034 DOI: 10.1073/pnas.2003266117   
2020 Chen YX, Xu ZY, Ge X, Sanyal S, Lu ZJ, Javid B. Selective translation by alternative bacterial ribosomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32723820 DOI: 10.1073/pnas.2009607117   
2020 Ferdosh S, Banerjee S, Pathak BK, Sengupta J, Barat C. Hibernating ribosomes exhibit chaperoning activity but can resist unfolded protein-mediated subunit dissociation. The Febs Journal. PMID 32649051 DOI: 10.1111/febs.15479   
2020 Zheng H, Lin S, Chen PR. Genetically encoded protein labeling and crosslinking in living Pseudomonas aeruginosa. Bioorganic & Medicinal Chemistry. 28: 115545. PMID 32503693 DOI: 10.1016/j.bmc.2020.115545   
2020 DiGiuseppe S, Rollins MG, Astar H, Khalatyan N, Savas JN, Walsh D. Proteomic and mechanistic dissection of the poxvirus-customized ribosome. Journal of Cell Science. PMID 32467327 DOI: 10.1242/jcs.246603   
2020 de Crécy-Lagard V, Ross RL, Jaroch M, Marchand V, Eisenhart C, Brégeon D, Motorin Y, Limbach PA. Survey and Validation of tRNA Modifications and Their Corresponding Genes in sp Subtilis Strain 168. Biomolecules. 10. PMID 32629984 DOI: 10.3390/biom10070977   
2020 Warren JM, Salinas-Giegé T, Hummel G, Coots NL, Svendsen JM, Brown KC, Drouard L, Sloan DB. Combining tRNA sequencing methods to characterize plant tRNA expression and post-transcriptional modification. Rna Biology. 1-15. PMID 32715941 DOI: 10.1080/15476286.2020.1792089   
2020 Wang T, Liang C, Zheng M, Liu L, An Y, Xu H, Xiao S, Nie L. Ribosome Hibernation as a Stress Response of Bacteria. Protein and Peptide Letters. PMID 32520673 DOI: 10.2174/0929866527666200610142118   
2020 Zhu Y, Weisshaar JC, Mustafi M. Long-term Effects of the Proline-rich Antimicrobial Peptide Oncocin112 on the translation machinery. The Journal of Biological Chemistry. PMID 32727850 DOI: 10.1074/jbc.RA120.013587   
2020 Khan K, Baleanu-Gogonea C, Willard B, Gogonea V, Fox PL. 3-Dimensional architecture of the human multi-tRNA synthetase complex. Nucleic Acids Research. PMID 32644155 DOI: 10.1093/nar/gkaa569   
2020 Nguyen HA, Sunita S, Dunham CM. Disruption of evolutionarily correlated tRNA elements impairs accurate decoding. Proceedings of the National Academy of Sciences of the United States of America. PMID 32601241 DOI: 10.1073/pnas.2004170117   
2020 Poubel SB, Holetz FB, Romagnoli BAA, Goldenberg S, Alves LR. Analysis of the In Vivo Translation Process in Trypanosoma cruzi Using Ribosome Profiling. Methods in Molecular Biology (Clifton, N.J.). 2116: 117-123. PMID 32221918 DOI: 10.1007/978-1-0716-0294-2_9   
2020 Wang J, Toffano-Nioche C, Lorieux F, Gautheret D, Lehmann J. Accurate characterization of tRNA modifications with a simple method of deep sequencing library preparation. Rna Biology. PMID 32618488 DOI: 10.1080/15476286.2020.1790871   
2020 An E, Friend K. mTORC1 Enhances Early Phase Ribosome Processivity. Frontiers in Molecular Biosciences. 7: 117. PMID 32656229 DOI: 10.3389/fmolb.2020.00117   
2020 Mutsuro-Aoki H, Hamachi K, Kurihara R, Tamura K. Aminoacylation of short hairpin RNAs through kissing-loop interactions indicates evolutionary trend of RNA molecules. Bio Systems. 104206. PMID 32640271 DOI: 10.1016/j.biosystems.2020.104206   
2020 Chen M, Kuhle B, Diedrich J, Liu Z, Moresco JJ, Yates Iii JR, Pan T, Yang XL. Cross-editing by a tRNA synthetase allows vertebrates to abundantly express mischargeable tRNA without causing mistranslation. Nucleic Acids Research. PMID 32484512 DOI: 10.1093/nar/gkaa469   
2020 Wells JN, Buschauer R, Mackens-Kiani T, Best K, Kratzat H, Berninghausen O, Becker T, Gilbert W, Cheng J, Beckmann R. Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biology. 18: e3000780. PMID 32687489 DOI: 10.1371/journal.pbio.3000780   
2020 Martinez-Seidel F, Beine-Golovchuk O, Hsieh YC, Kopka J. Systematic Review of Plant Ribosome Heterogeneity and Specialization. Frontiers in Plant Science. 11: 948. PMID 32670337 DOI: 10.3389/fpls.2020.00948   
2020 Teramoto T, Kaitany KJ, Kakuta Y, Kimura M, Fierke CA, Hall TMT. Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA. Nucleic Acids Research. PMID 32719843 DOI: 10.1093/nar/gkaa627   
2020 Loveland AB, Demo G, Korostelev AA. Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature. PMID 32612237 DOI: 10.1038/s41586-020-2447-x   
2020 Kimura S, Dedon PC, Waldor MK. Comparative tRNA sequencing and RNA mass spectrometry for surveying tRNA modifications. Nature Chemical Biology. PMID 32514182 DOI: 10.1038/s41589-020-0558-1   
2020 Sharifi S, Costa HFRD, Bierhoff H. The circuitry between ribosome biogenesis and translation in stem cell function and ageing. Mechanisms of Ageing and Development. 111282. PMID 32531294 DOI: 10.1016/j.mad.2020.111282   
2020 Correddu D, Sharma N, Kaur S, Varnava KG, Mbenza NM, Sarojini V, Leung IKH. An investigation into the effect of ribosomal protein S15 phosphorylation on its intermolecular interactions by using phosphomimetic mutant. Chemical Communications (Cambridge, England). PMID 32583822 DOI: 10.1039/d0cc01618g   
2020 Bohlen J, Fenzl K, Kramer G, Bukau B, Teleman AA. Selective 40S Footprinting Reveals Cap-Tethered Ribosome Scanning in Human Cells. Molecular Cell. PMID 32589966 DOI: 10.1016/j.molcel.2020.06.005   
2020 Keffer-Wilkes LC, Soon EF, Kothe U. The methyltransferase TrmA facilitates tRNA folding through interaction with its RNA-binding domain. Nucleic Acids Research. PMID 32597953 DOI: 10.1093/nar/gkaa548   
2020 Keffer-Wilkes LC, Soon EF, Kothe U. The methyltransferase TrmA facilitates tRNA folding through interaction with its RNA-binding domain. Nucleic Acids Research. PMID 32597953 DOI: 10.1093/nar/gkaa548   
2020 Szavits-Nossan J, Evans MR. Dynamics of ribosomes in mRNA translation under steady- and nonsteady-state conditions. Physical Review. E. 101: 062404. PMID 32688522 DOI: 10.1103/PhysRevE.101.062404   
2020 Cassaignau AME, Cabrita LD, Christodoulou J. How Does the Ribosome Fold the Proteome? Annual Review of Biochemistry. 89: 389-415. PMID 32569518 DOI: 10.1146/annurev-biochem-062917-012226   
2020 Ovchinnikov SV, Bikmetov D, Livenskyi A, Serebryakova M, Wilcox B, Mangano K, Shiriaev DI, Osterman IA, Sergiev PV, Borukhov S, Vazquez-Laslop N, Mankin AS, Severinov K, Dubiley S. Mechanism of translation inhibition by type II GNAT toxin AtaT2. Nucleic Acids Research. PMID 32597957 DOI: 10.1093/nar/gkaa551   
2020 Killeavy EE, Jogl G, Gregory ST. Tiamulin-Resistant Mutants of the Thermophilic Bacterium . Antibiotics (Basel, Switzerland). 9. PMID 32526926 DOI: 10.3390/antibiotics9060313   
2020 Wang W, Li W, Ge X, Yan K, Mandava CS, Sanyal S, Gao N. Loss of a single methylation in 23S rRNA delays 50S assembly at multiple late stages and impairs translation initiation and elongation. Proceedings of the National Academy of Sciences of the United States of America. PMID 32571953 DOI: 10.1073/pnas.1914323117   
2020 Wu CC, Peterson A, Zinshteyn B, Regot S, Green R. Ribosome Collisions Trigger General Stress Responses to Regulate Cell Fate. Cell. PMID 32610081 DOI: 10.1016/j.cell.2020.06.006   
2020 Ojha S, Malla S, Lyons SM. snoRNPs: Functions in Ribosome Biogenesis. Biomolecules. 10. PMID 32443616 DOI: 10.3390/biom10050783   
2020 Grenga L, Little RH, Chandra G, Woodcock SD, Saalbach G, Morris RJ, Malone JG. Control of mRNA translation by dynamic ribosome modification. Plos Genetics. 16: e1008837. PMID 32584816 DOI: 10.1371/journal.pgen.1008837   
2020 Borek C, Reichle VF, Kellner S. Synthesis and Metabolic Fate of 4-Methylthiouridine in Bacterial tRNA. Chembiochem : a European Journal of Chemical Biology. PMID 32394608 DOI: 10.1002/cbic.202000272