Anthony T. Iavarone, Ph.D. - Publications

Affiliations: 
2004 University of California, Berkeley, Berkeley, CA 
Area:
mass spectrometry

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Regazzoni LG, Grigoryan H, Ji Z, Chen X, Daniels SI, Huang D, Sanchez S, Tang N, Sillé FC, Iavarone AT, Williams ER, Zhang L, Rappaport SM. Using lysine adducts of human serum albumin to investigate the disposition of exogenous formaldehyde in human blood. Toxicology Letters. PMID 28104429 DOI: 10.1016/j.toxlet.2017.01.002  1
2016 Lu SS, Grigoryan H, Edmands WM, Hu W, Iavarone AT, Hubbard A, Rothman N, Vermeulen R, Lan Q, Rappaport SM. Profiling the Serum Albumin Cys34 Adductome of Solid Fuel Users in Xuanwei and Fuyuan, China. Environmental Science & Technology. PMID 27936627 DOI: 10.1021/acs.est.6b03955  0.36
2016 Grigoryan H, Edmands WM, Lu SS, Yano Y, Regazzoni L, Iavarone AT, Williams ER, Rappaport SM. An adductomics pipeline for untargeted analysis of modifications to Cys34 of human serum albumin. Analytical Chemistry. PMID 27684351 DOI: 10.1021/acs.analchem.6b02553  1
2016 Perttula K, Edmands WM, Grigoryan H, Cai X, Iavarone AT, Gunter MJ, Naccarati A, Polidoro S, Hubbard A, Vineis P, Rappaport SM. Evaluating Ultra-long Chain Fatty Acids as Biomarkers of Colorectal Cancer Risk. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 27257090 DOI: 10.1158/1055-9965.EPI-16-0204  0.36
2016 Miller MR, Mannowetz N, Iavarone AT, Safavi R, Gracheva EO, Smith JF, Hill RZ, Bautista DM, Kirichok Y, Lishko PV. Unconventional endocannabinoid signaling governs sperm activation via sex hormone progesterone. Science (New York, N.Y.). PMID 26989199 DOI: 10.1126/science.aad6887  1
2016 Barr I, Latham JA, Iavarone AT, Chantarojsiri T, Hwang JD, Klinman JP. The pyrroloquinoline quinone (PQQ) biosynthetic pathway: Demonstration of de novo carbon-carbon cross-linking within the peptide substrate (PqqA) in the presence of the Radical SAM enzyme (PqqE) and its peptide chaperone (PqqD). The Journal of Biological Chemistry. PMID 26961875 DOI: 10.1074/jbc.C115.699918  1
2015 Carlström CI, Loutey D, Bauer S, Clark IC, Rohde RA, Iavarone AT, Lucas L, Coates JD. (Per)chlorate-reducing bacteria can utilize aerobic and anaerobic pathways of aromatic degradation with (per)chlorate as an electron acceptor. Mbio. 6. PMID 25805732 DOI: 10.1128/mBio.02287-14  1
2015 Latham JA, Iavarone AT, Barr I, Juthani PV, Klinman JP. PqqD is a novel peptide chaperone that forms a ternary complex with the radical S-adenosylmethionine protein PqqE in the pyrroloquinoline quinone biosynthetic pathway Journal of Biological Chemistry. 290: 12908-12918. DOI: 10.1074/jbc.M115.646521  1
2014 Clark IC, Melnyk RA, Iavarone AT, Novichkov PS, Coates JD. Chlorate reduction in Shewanella algae ACDC is a recently acquired metabolism characterized by gene loss, suboptimal regulation and oxidative stress. Molecular Microbiology. 94: 107-25. PMID 25099177 DOI: 10.1111/mmi.12746  1
2014 Baer CE, Iavarone AT, Alber T, Sassetti CM. Biochemical and spatial coincidence in the provisional Ser/Thr protein kinase interaction network of Mycobacterium tuberculosis. The Journal of Biological Chemistry. 289: 20422-33. PMID 24928517 DOI: 10.1074/jbc.M114.559054  1
2014 Smith EL, Giddens JP, Iavarone AT, Godula K, Wang LX, Bertozzi CR. Chemoenzymatic Fc glycosylation via engineered aldehyde tags. Bioconjugate Chemistry. 25: 788-95. PMID 24702330 DOI: 10.1021/bc500061s  1
2014 Underbakke ES, Iavarone AT, Chalmers MJ, Pascal BD, Novick S, Griffin PR, Marletta MA. Nitric oxide-induced conformational changes in soluble guanylate cyclase. Structure (London, England : 1993). 22: 602-11. PMID 24560804 DOI: 10.1016/j.str.2014.01.008  1
2014 Jinek M, Jiang F, Taylor DW, Sternberg SH, Kaya E, Ma E, Anders C, Hauer M, Zhou K, Lin S, Kaplan M, Iavarone AT, Charpentier E, Nogales E, Doudna JA. Structures of Cas9 endonucleases reveal RNA-mediated conformational activation. Science (New York, N.Y.). 343: 1247997. PMID 24505130 DOI: 10.1126/science.1247997  1
2014 Chung MK, Grigoryan H, Iavarone AT, Rappaport SM. Antibody enrichment and mass spectrometry of albumin-Cys34 adducts. Chemical Research in Toxicology. 27: 400-7. PMID 24328277 DOI: 10.1021/tx400337k  1
2013 Witus LS, Netirojjanakul C, Palla KS, Muehl EM, Weng CH, Iavarone AT, Francis MB. Site-specific protein transamination using N-methylpyridinium-4- carboxaldehyde Journal of the American Chemical Society. 135: 17223-17229. PMID 24191658 DOI: 10.1021/ja408868a  1
2013 Cantrell SA, Leavell MD, Marjanovic O, Iavarone AT, Leary JA, Riley LW. Free mycolic acid accumulation in the cell wall of the mce1 operon mutant strain of Mycobacterium tuberculosis. Journal of Microbiology (Seoul, Korea). 51: 619-26. PMID 24037657 DOI: 10.1007/s12275-013-3092-y  1
2013 Sadhu MJ, Guan Q, Li F, Sales-Lee J, Iavarone AT, Hammond MC, Cande WZ, Rine J. Nutritional control of epigenetic processes in yeast and human cells. Genetics. 195: 831-44. PMID 23979574 DOI: 10.1534/genetics.113.153981  1
2013 Bonnot F, Iavarone AT, Klinman JP. Multistep, eight-electron oxidation catalyzed by the cofactorless oxidase, PqqC: Identification of chemical intermediates and their dependence on molecular oxygen Biochemistry. 52: 4667-4675. PMID 23718207 DOI: 10.1021/bi4003315  1
2013 Carlson HK, Clark IC, Blazewicz SJ, Iavarone AT, Coates JD. Fe(II) oxidation is an innate capability of nitrate-reducing bacteria that involves abiotic and biotic reactions. Journal of Bacteriology. 195: 3260-8. PMID 23687275 DOI: 10.1128/JB.00058-13  1
2013 Carlson HK, Iavarone AT, Coates JD. Surfaceomics and surface-enhanced Raman spectroscopy of environmental microbes: matching cofactors with redox-active surface proteins. Proteomics. 13: 2761-5. PMID 23616463 DOI: 10.1002/pmic.201300010  1
2013 Underbakke ES, Iavarone AT, Marletta MA. Higher-order interactions bridge the nitric oxide receptor and catalytic domains of soluble guanylate cyclase. Proceedings of the National Academy of Sciences of the United States of America. 110: 6777-82. PMID 23572573 DOI: 10.1073/pnas.1301934110  1
2013 Osborne RL, Zhu H, Iavarone AT, Blackburn NJ, Klinman JP. Interdomain long-range electron transfer becomes rate-limiting in the Y216A variant of tyramine β-monooxygenase Biochemistry. 52: 1179-1191. PMID 23320946 DOI: 10.1021/bi3013609  1
2013 Netirojjanakul C, Witus LS, Behrens CR, Weng CH, Iavarone AT, Francis MB. Synthetically modified Fc domains as building blocks for immunotherapy applications Chemical Science. 4: 266-272. DOI: 10.1039/c2sc21365f  1
2012 Weilhammer DR, Iavarone AT, Villegas EN, Brooks GA, Sinai AP, Sha WC. Host metabolism regulates growth and differentiation of Toxoplasma gondii. International Journal For Parasitology. 42: 947-59. PMID 22940576 DOI: 10.1016/j.ijpara.2012.07.011  1
2012 Osborne RL, Zhu H, Iavarone AT, Hess CR, Klinman JP. Inactivation of Met471Cys tyramine β-monooxygenase results from site-specific cysteic acid formation Biochemistry. 51: 7488-7495. PMID 22891760 DOI: 10.1021/bi300456f  1
2012 Zheng Y, Kim SH, Patel AB, Narayanaswami V, Iavarone AT, Hura GL, Bielicki JK. The positional specificity of EXXK motifs within an amphipathic α-helix dictates preferential lysine modification by acrolein: implications for the design of high-density lipoprotein mimetic peptides. Biochemistry. 51: 6400-12. PMID 22800301 DOI: 10.1021/bi300626g  1
2012 Grigoryan H, Li H, Iavarone AT, Williams ER, Rappaport SM. Cys34 adducts of reactive oxygen species in human serum albumin. Chemical Research in Toxicology. 25: 1633-42. PMID 22591159 DOI: 10.1021/tx300096a  1
2012 Znameroski EA, Coradetti ST, Roche CM, Tsai JC, Iavarone AT, Cate JH, Glass NL. Induction of lignocellulose-degrading enzymes in Neurospora crassa by cellodextrins. Proceedings of the National Academy of Sciences of the United States of America. 109: 6012-7. PMID 22474347 DOI: 10.1073/pnas.1118440109  1
2012 Totir M, Echols N, Nanao M, Gee CL, Moskaleva A, Gradia S, Iavarone AT, Berger JM, May AP, Zubieta C, Alber T. Macro-to-micro structural proteomics: native source proteins for high-throughput crystallization. Plos One. 7: e32498. PMID 22393408 DOI: 10.1371/journal.pone.0032498  1
2012 Carlson HK, Iavarone AT, Gorur A, Yeo BS, Tran R, Melnyk RA, Mathies RA, Auer M, Coates JD. Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria. Proceedings of the National Academy of Sciences of the United States of America. 109: 1702-7. PMID 22307634 DOI: 10.1073/pnas.1112905109  1
2012 Clark IC, Carlson HK, Iavarone AT, Coates JD. Bioelectrical redox cycling of anthraquinone-2,6-disulfonate coupled to perchlorate reduction Energy and Environmental Science. 5: 7970-7978. DOI: 10.1039/c2ee21594b  1
2011 Phillips CM, Iavarone AT, Marletta MA. Quantitative proteomic approach for cellulose degradation by Neurospora crassa. Journal of Proteome Research. 10: 4177-85. PMID 21744778 DOI: 10.1021/pr200329b  1
2011 Marjanovic O, Iavarone AT, Riley LW. Sulfolipid accumulation in Mycobacterium tuberculosis disrupted in the mce2 operon. Journal of Microbiology (Seoul, Korea). 49: 441-7. PMID 21717330 DOI: 10.1007/s12275-011-0435-4  1
2011 Williamson A, Banerjee S, Zhu X, Philipp I, Iavarone AT, Rape M. Regulation of ubiquitin chain initiation to control the timing of substrate degradation. Molecular Cell. 42: 744-57. PMID 21700221 DOI: 10.1016/j.molcel.2011.04.022  1
2011 Brown ME, Walker MC, Nakashige TG, Iavarone AT, Chang MC. Discovery and characterization of heme enzymes from unsequenced bacteria: application to microbial lignin degradation. Journal of the American Chemical Society. 133: 18006-9. PMID 21671563 DOI: 10.1021/ja203972q  1
2011 Palaniappan KK, Pitcher AA, Smart BP, Spiciarich DR, Iavarone AT, Bertozzi CR. Isotopic signature transfer and mass pattern prediction (IsoStamp): an enabling technique for chemically-directed proteomics. Acs Chemical Biology. 6: 829-36. PMID 21604797 DOI: 10.1021/cb100338x  1
2011 Beeson WT, Iavarone AT, Hausmann CD, Cate JH, Marletta MA. Extracellular aldonolactonase from Myceliophthora thermophila. Applied and Environmental Microbiology. 77: 650-6. PMID 21075873 DOI: 10.1128/AEM.01922-10  1
2010 Witus LS, Moore T, Thuronyi BW, Esser-Kahn AP, Scheck RA, Iavarone AT, Francis MB. Identification of highly reactive sequences for PLP-mediated bioconjugation using a combinatorial peptide library. Journal of the American Chemical Society. 132: 16812-7. PMID 21067189 DOI: 10.1021/ja105429n  1
2010 Zadrozny JM, Freedman DE, Jenkins DM, Harris TD, Iavarone AT, Mathonière C, Clérac R, Long JR. Slow magnetic relaxation and charge-transfer in cyano-bridged coordination clusters incorporating [Re(CN)(7)](3-/4-). Inorganic Chemistry. 49: 8886-96. PMID 20804139 DOI: 10.1021/ic101132z  1
2010 Wecksler SR, Stoll S, Iavarone AT, Imsand EM, Tran H, Britt RD, Klinman JP. Interaction of PqqE and PqqD in the pyrroloquinoline quinone (PQQ) biosynthetic pathway links PqqD to the radical SAM superfamily. Chemical Communications (Cambridge, England). 46: 7031-3. PMID 20737074 DOI: 10.1039/c0cc00968g  1
2010 Bechlars B, D'Alessandro DM, Jenkins DM, Iavarone AT, Glover SD, Kubiak CP, Long JR. High-spin ground states via electron delocalization in mixed-valence imidazolate-bridged divanadium complexes. Nature Chemistry. 2: 362-8. PMID 20414235 DOI: 10.1038/nchem.585  1
2010 Srikun D, Albers AE, Nam CI, Iavarone AT, Chang CJ. Organelle-targetable fluorescent probes for imaging hydrogen peroxide in living cells via SNAP-Tag protein labeling. Journal of the American Chemical Society. 132: 4455-65. PMID 20201528 DOI: 10.1021/ja100117u  1
2010 Chung MK, Riby J, Li H, Iavarone AT, Williams ER, Zheng Y, Rappaport SM. A sandwich enzyme-linked immunosorbent assay for adducts of polycyclic aromatic hydrocarbons with human serum albumin. Analytical Biochemistry. 400: 123-9. PMID 20083082 DOI: 10.1016/j.ab.2010.01.018  1
2010 Funk WE, Li H, Iavarone AT, Williams ER, Riby J, Rappaport SM. Enrichment of cysteinyl adducts of human serum albumin. Analytical Biochemistry. 400: 61-8. PMID 20074543 DOI: 10.1016/j.ab.2010.01.006  1
2009 Tian C, Beeson WT, Iavarone AT, Sun J, Marletta MA, Cate JH, Glass NL. Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa. Proceedings of the National Academy of Sciences of the United States of America. 106: 22157-62. PMID 20018766 DOI: 10.1073/pnas.0906810106  1
2009 Crimmins GT, Schelle MW, Herskovits AA, Ni PP, Kline BC, Meyer-Morse N, Iavarone AT, Portnoy DA. Listeria monocytogenes 6-Phosphogluconolactonase mutants induce increased activation of a host cytosolic surveillance pathway. Infection and Immunity. 77: 3014-22. PMID 19398547 DOI: 10.1128/IAI.01511-08  1
2009 Antos JM, McFarland JM, Iavarone AT, Francis MB. Chemoselective tryptophan labeling with rhodium carbenoids at mild pH. Journal of the American Chemical Society. 131: 6301-8. PMID 19366262 DOI: 10.1021/ja900094h  1
2008 Mieczkowski C, Iavarone AT, Alber T. Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase. The Embo Journal. 27: 3186-97. PMID 19008858 DOI: 10.1038/emboj.2008.236  1
2008 Esser-Kahn AP, Iavarone AT, Francis MB. Metallothionein-cross-linked hydrogels for the selective removal of heavy metals from water. Journal of the American Chemical Society. 130: 15820-2. PMID 18980305 DOI: 10.1021/ja807095r  1
2008 Scheck RA, Dedeo MT, Iavarone AT, Francis MB. Optimization of a biomimetic transamination reaction. Journal of the American Chemical Society. 130: 11762-70. PMID 18683929 DOI: 10.1021/ja802495w  1
2008 Hatzios SK, Iavarone AT, Bertozzi CR. Rv2131c from Mycobacterium tuberculosis is a CysQ 3'-phosphoadenosine-5'-phosphatase. Biochemistry. 47: 5823-31. PMID 18454554 DOI: 10.1021/bi702453s  1
2008 Freedman DE, Jenkins DM, Iavarone AT, Long JR. A redox-switchable single-molecule magnet incorporating [Re(CN)7]3-. Journal of the American Chemical Society. 130: 2884-5. PMID 18271583 DOI: 10.1021/ja077527x  1
2008 Dincǎ M, Harris TD, Iavarone AT, Long JR. Synthesis and characterization of the cubic coordination cluster [CoIII 6 CoII 2 (IBT)12]14 - (H3IBT = 4,5-bis(tetrazol-5-yl)imidazole) Journal of Molecular Structure. 890: 139-143. DOI: 10.1016/j.molstruc.2008.03.048  1
2007 Iavarone AT, Patriksson A, van der Spoel D, Parks JH. Fluorescence probe of Trp-cage protein conformation in solution and in gas phase. Journal of the American Chemical Society. 129: 6726-35. PMID 17487969 DOI: 10.1021/ja065092s  1
2006 Iavarone AT, Duft D, Parks JH. Shedding light on biomolecule conformational dynamics using fluorescence measurements of trapped ions. The Journal of Physical Chemistry. A. 110: 12714-27. PMID 17125284 DOI: 10.1021/jp064933e  1
2006 Iavarone AT, Meinen J, Schulze S, Parks JH. Fluorescence probe of polypeptide conformational dynamics in gas phase and in solution International Journal of Mass Spectrometry. 253: 172-180. DOI: 10.1016/j.ijms.2005.11.026  1
2005 Iavarone AT, Parks JH. Conformational change in unsolvated Trp-cage protein probed by fluorescence. Journal of the American Chemical Society. 127: 8606-7. PMID 15954761 DOI: 10.1021/ja051788u  1
2004 Iavarone AT, Udekwu OA, Williams ER. Buffer loading for counteracting metal salt-induced signal suppression in electrospray ionization. Analytical Chemistry. 76: 3944-50. PMID 15253628 DOI: 10.1021/ac049724+  1
2004 Iavarone AT, Paech K, Williams ER. Effects of charge state and cationizing agent on the electron capture dissociation of a peptide. Analytical Chemistry. 76: 2231-8. PMID 15080732 DOI: 10.1021/ac035431p  1
2003 Iavarone AT, Williams ER. Collisionally activated dissociation of supercharged proteins formed by electrospray ionization. Analytical Chemistry. 75: 4525-33. PMID 14632060 DOI: 10.1021/ac034144i  1
2003 Iavarone AT, Williams ER. Mechanism of charging and supercharging molecules in electrospray ionization. Journal of the American Chemical Society. 125: 2319-27. PMID 12590562 DOI: 10.1021/ja021202t  1
2002 Iavarone AT, Williams ER. Supercharging in electrospray ionization: Effects on signal and charge International Journal of Mass Spectrometry. 219: 63-72. DOI: 10.1016/S1387-3806(02)00587-0  1
2002 Iavarone AT, Williams ER. The mechanism of supercharging in electrospray ionization Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 831-832.  1
2001 Iavarone AT, Jurchen JC, Williams ER. Supercharged protein and peptide ions formed by electrospray ionization. Analytical Chemistry. 73: 1455-60. PMID 11321294 DOI: 10.1021/ac001251t  1
2000 Iavarone AT, Jurchen JC, Williams ER. Effects of solvent on the maximum charge state and charge state distribution of protein ions produced by electrospray ionization. Journal of the American Society For Mass Spectrometry. 11: 976-85. PMID 11073261 DOI: 10.1016/S1044-0305(00)00169-0  1
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