Douglas B. Weibel, Ph.D. - Publications

2003 Cornell University, Ithaca, NY, United States 
 2006- University of Wisconsin, Madison, Madison, WI 
Biosynthesis of biologically active natural products

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Trivedi RR, Crooks JA, Auer GK, Pendry J, Foik IP, Siryaporn A, Abbott NL, Gitai Z, Weibel DB. Mechanical Genomic Studies Reveal the Role of d-Alanine Metabolism in Pseudomonas aeruginosa Cell Stiffness. Mbio. 9. PMID 30206169 DOI: 10.1128/Mbio.01340-18  0.8
2016 Mushenheim PC, Pendery JS, Weibel DB, Spagnolie SE, Abbott NL. Straining soft colloids in aqueous nematic liquid crystals. Proceedings of the National Academy of Sciences of the United States of America. PMID 27140607 DOI: 10.1073/Pnas.1600836113  1
2016 Lin TY, Weibel DB. Organization and function of anionic phospholipids in bacteria. Applied Microbiology and Biotechnology. PMID 27026177 DOI: 10.1007/S00253-016-7468-X  1
2016 Hurley KA, Santos TM, Nepomuceno GM, Huynh V, Shaw JT, Weibel DB. Targeting the bacterial division protein FtsZ. Journal of Medicinal Chemistry. PMID 26756351 DOI: 10.1021/Acs.Jmedchem.5B01098  1
2015 Rajendram M, Zhang L, Reynolds BJ, Auer GK, Tuson HH, Ngo KV, Cox MM, Yethiraj A, Cui Q, Weibel DB. Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli. Molecular Cell. 60: 374-84. PMID 26481664 DOI: 10.1016/J.Molcel.2015.09.009  0.56
2015 Trivedi RR, Maeda R, Abbott NL, Spagnolie SE, Weibel DB. Bacterial transport of colloids in liquid crystalline environments. Soft Matter. 11: 8404-8. PMID 26382153 DOI: 10.1039/C5Sm02041G  1
2015 Crooks JA, Stilwell MD, Oliver PM, Zhong Z, Weibel DB. Decoding the Chemical Language of Motile Bacteria by Using High-Throughput Microfluidic Assays. Chembiochem : a European Journal of Chemical Biology. 16: 2151-5. PMID 26285783 DOI: 10.1002/Cbic.201500324  1
2015 Lin TY, Santos TM, Kontur WS, Donohue TJ, Weibel DB. A Cardiolipin-Deficient Mutant of Rhodobacter sphaeroides Has an Altered Cell Shape and Is Impaired in Biofilm Formation. Journal of Bacteriology. 197: 3446-55. PMID 26283770 DOI: 10.1128/Jb.00420-15  1
2015 Mushenheim PC, Trivedi RR, Roy SS, Arnold MS, Weibel DB, Abbott NL. Effects of confinement, surface-induced orientations and strain on dynamical behaviors of bacteria in thin liquid crystalline films. Soft Matter. 11: 6821-31. PMID 26224035 DOI: 10.1039/C5Sm01489A  0.8
2015 Liljander A, Yu M, O'Brien E, Heller M, Nepper JF, Weibel DB, Gluecks I, Younan M, Frey J, Falquet L, Jores J. Field-Applicable Recombinase Polymerase Amplification Assay for Rapid Detection of Mycoplasma capricolum subsp. capripneumoniae. Journal of Clinical Microbiology. 53: 2810-5. PMID 26085615 DOI: 10.1128/Jcm.00623-15  1
2015 Derda R, Gitaka J, Klapperich CM, Mace CR, Kumar AA, Lieberman M, Linnes JC, Jores J, Nasimolo J, Ndung'u J, Taracha E, Weaver A, Weibel DB, Kariuki TM, Yager P. Enabling the Development and Deployment of Next Generation Point-of-Care Diagnostics. Plos Neglected Tropical Diseases. 9: e0003676. PMID 25973602 DOI: 10.1371/Journal.Pntd.0003676  1
2015 Hurley KA, Heinrich VA, Hershfield JR, Demons ST, Weibel DB. Membrane-Targeting DCAP Analogues with Broad-Spectrum Antibiotic Activity against Pathogenic Bacteria. Acs Medicinal Chemistry Letters. 6: 466-71. PMID 25941556 DOI: 10.1021/Acsmedchemlett.5B00024  1
2015 Mushenheim PC, Trivedi RR, Roy SS, Arnold MS, Weibel DB, Abbott NL. Effects of confinement, surface-induced orientations and strain on dynamical behaviors of bacteria in thin liquid crystalline films Soft Matter. 11: 6821-6831. DOI: 10.1039/c5sm01489a  1
2014 Hemling M, Crooks JA, Oliver PM, Brenner K, Gilbertson J, Lisensky GC, Weibel DB. Microfluidics for High School Chemistry Students. Journal of Chemical Education. 91: 112-115. PMID 25584013 DOI: 10.1021/Ed4003018  1
2014 Oliver PM, Crooks JA, Leidl M, Yoon EJ, Saghatelian A, Weibel DB. Localization of anionic phospholipids in Escherichia coli cells. Journal of Bacteriology. 196: 3386-98. PMID 25002539 DOI: 10.1128/Jb.01877-14  1
2014 Mushenheim PC, Trivedi RR, Weibel DB, Abbott NL. Using liquid crystals to reveal how mechanical anisotropy changes interfacial behaviors of motile bacteria. Biophysical Journal. 107: 255-65. PMID 24988359 DOI: 10.1016/J.Bpj.2014.04.047  1
2014 Santos TM, Lin TY, Rajendran M, Anderson SM, Weibel DB. Polar localization of Escherichia coli chemoreceptors requires an intact Tol-Pal complex. Molecular Microbiology. 92: 985-1004. PMID 24720726 DOI: 10.1111/Mmi.12609  1
2014 Rajendram M, Hurley KA, Foss MH, Thornton KM, Moore JT, Shaw JT, Weibel DB. Gyramides prevent bacterial growth by inhibiting DNA gyrase and altering chromosome topology. Acs Chemical Biology. 9: 1312-9. PMID 24712739 DOI: 10.1021/Cb500154M  1
2014 Mushenheim PC, Trivedi RR, Tuson HH, Weibel DB, Abbott NL. Dynamic self-assembly of motile bacteria in liquid crystals. Soft Matter. 10: 88-95. PMID 24652584 DOI: 10.1039/C3Sm52423J  1
2014 Yin N, Santos TM, Auer GK, Crooks JA, Oliver PM, Weibel DB. Bacterial cellulose as a substrate for microbial cell culture. Applied and Environmental Microbiology. 80: 1926-32. PMID 24441155 DOI: 10.1128/Aem.03452-13  1
2013 Renner LD, Eswaramoorthy P, Ramamurthi KS, Weibel DB. Studying biomolecule localization by engineering bacterial cell wall curvature. Plos One. 8: e84143. PMID 24391905 DOI: 10.1371/Journal.Pone.0084143  1
2013 Swiecicki JM, Sliusarenko O, Weibel DB. From swimming to swarming: Escherichia coli cell motility in two-dimensions. Integrative Biology : Quantitative Biosciences From Nano to Macro. 5: 1490-4. PMID 24145500 DOI: 10.1039/C3Ib40130H  1
2013 Tuson HH, Weibel DB. Bacteria-surface interactions. Soft Matter. 9: 4368-4380. PMID 23930134 DOI: 10.1039/C3Sm27705D  0.56
2013 Jakiela S, Kaminski TS, Cybulski O, Weibel DB, Garstecki P. Bacterial growth and adaptation in microdroplet chemostats. Angewandte Chemie (International Ed. in English). 52: 8908-11. PMID 23832572 DOI: 10.1002/Anie.201301524  1
2013 Eun YJ, Zhou M, Kiekebusch D, Schlimpert S, Trivedi RR, Bakshi S, Zhong Z, Wahlig TA, Thanbichler M, Weibel DB. Divin: a small molecule inhibitor of bacterial divisome assembly. Journal of the American Chemical Society. 135: 9768-76. PMID 23738839 DOI: 10.1021/Ja404640F  1
2013 Foss MH, Eun YJ, Grove CI, Pauw DA, Sorto NA, Rensvold JW, Pagliarini DJ, Shaw JT, Weibel DB. Inhibitors of bacterial tubulin target bacterial membranes in vivo. Medchemcomm. 4: 112-119. PMID 23539337 DOI: 10.1039/C2Md20127E  1
2013 Tuson HH, Copeland MF, Carey S, Sacotte R, Weibel DB. Flagellum density regulates Proteus mirabilis swarmer cell motility in viscous environments. Journal of Bacteriology. 195: 368-77. PMID 23144253 DOI: 10.1128/Jb.01537-12  0.56
2012 Renner LD, Weibel DB. MinD and MinE interact with anionic phospholipids and regulate division plane formation in Escherichia coli. The Journal of Biological Chemistry. 287: 38835-44. PMID 23012351 DOI: 10.1074/Jbc.M112.407817  1
2012 Ho JY, Cira NJ, Crooks JA, Baeza J, Weibel DB. Rapid identification of ESKAPE bacterial strains using an autonomous microfluidic device. Plos One. 7: e41245. PMID 22848451 DOI: 10.1371/Journal.Pone.0041245  1
2012 Hou S, Wieczorek SA, Kaminski TS, Ziebacz N, Tabaka M, Sorto NA, Foss MH, Shaw JT, Thanbichler M, Weibel DB, Nieznanski K, Holyst R, Garstecki P. Characterization of Caulobacter crescentus FtsZ protein using dynamic light scattering. The Journal of Biological Chemistry. 287: 23878-86. PMID 22573335 DOI: 10.1074/Jbc.M111.309492  1
2012 Tuson HH, Auer GK, Renner LD, Hasebe M, Tropini C, Salick M, Crone WC, Gopinathan A, Huang KC, Weibel DB. Measuring the stiffness of bacterial cells from growth rates in hydrogels of tunable elasticity. Molecular Microbiology. 84: 874-91. PMID 22548341 DOI: 10.1111/J.1365-2958.2012.08063.X  1
2012 Churski K, Kaminski TS, Jakiela S, Kamysz W, Baranska-Rybak W, Weibel DB, Garstecki P. Rapid screening of antibiotic toxicity in an automated microdroplet system. Lab On a Chip. 12: 1629-37. PMID 22422170 DOI: 10.1039/C2Lc21284F  1
2012 Tuson HH, Renner LD, Weibel DB. Polyacrylamide hydrogels as substrates for studying bacteria. Chemical Communications (Cambridge, England). 48: 1595-7. PMID 22039586 DOI: 10.1039/C1Cc14705F  1
2011 Renner LD, Weibel DB. Physicochemical regulation of biofilm formation. Mrs Bulletin / Materials Research Society. 36: 347-355. PMID 22125358 DOI: 10.1557/Mrs.2011.65  1
2011 Foss MH, Hurley KA, Sorto N, Lackner LL, Thornton KM, Shaw JT, Weibel DB. N-Benzyl-3-sulfonamidopyrrolidines are a New Class of Bacterial DNA Gyrase Inhibitors. Acs Medicinal Chemistry Letters. 2: 289-292. PMID 21552338 DOI: 10.1021/Ml1002822  1
2011 Renner LD, Weibel DB. Cardiolipin microdomains localize to negatively curved regions of Escherichia coli membranes. Proceedings of the National Academy of Sciences of the United States of America. 108: 6264-9. PMID 21444798 DOI: 10.1073/Pnas.1015757108  1
2011 Flickinger ST, Copeland MF, Downes EM, Braasch AT, Tuson HH, Eun YJ, Weibel DB. Quorum sensing between Pseudomonas aeruginosa biofilms accelerates cell growth. Journal of the American Chemical Society. 133: 5966-75. PMID 21434644 DOI: 10.1021/Ja111131F  0.56
2011 Eun YJ, Utada AS, Copeland MF, Takeuchi S, Weibel DB. Encapsulating bacteria in agarose microparticles using microfluidics for high-throughput cell analysis and isolation. Acs Chemical Biology. 6: 260-6. PMID 21142208 DOI: 10.1021/Cb100336P  1
2010 Copeland MF, Flickinger ST, Tuson HH, Weibel DB. Studying the dynamics of flagella in multicellular communities of Escherichia coli by using biarsenical dyes. Applied and Environmental Microbiology. 76: 1241-50. PMID 20023074 DOI: 10.1128/Aem.02153-09  0.56
2009 Garstecki P, Tierno P, Weibel DB, Sagués F, Whitesides GM. Propulsion of flexible polymer structures in a rotating magnetic field. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 21: 204110. PMID 21825519 DOI: 10.1088/0953-8984/21/20/204110  1
2009 Bean GJ, Flickinger ST, Westler WM, McCully ME, Sept D, Weibel DB, Amann KJ. A22 disrupts the bacterial actin cytoskeleton by directly binding and inducing a low-affinity state in MreB. Biochemistry. 48: 4852-7. PMID 19382805 DOI: 10.1021/Bi900014D  1
2009 Muralimohan A, Eun YJ, Bhattacharyya B, Weibel DB. Dissecting microbiological systems using materials science. Trends in Microbiology. 17: 100-8. PMID 19243949 DOI: 10.1016/J.Tim.2008.11.007  1
2008 Krishnamurthy VM, Kaufman GK, Urbach AR, Gitlin I, Gudiksen KL, Weibel DB, Whitesides GM. Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding. Chemical Reviews. 108: 946-1051. PMID 18335973 DOI: 10.1021/Cr050262P  1
2008 Winkleman A, McCarty LS, Zhu T, Weibel DB, Suo Z, Whitesides GM. Templated self-assembly over patterned electrodes by an applied electric field: Geometric constraints and diversity of materials Journal of Microelectromechanical Systems. 17: 900-910. DOI: 10.1109/Jmems.2008.922079  1
2007 Weibel DB, Siegel AC, Lee A, George AH, Whitesides GM. Pumping fluids in microfluidic systems using the elastic deformation of poly(dimethylsiloxane). Lab On a Chip. 7: 1832-6. PMID 18030408 DOI: 10.1039/B714664G  1
2007 Garner EC, Campbell CS, Weibel DB, Mullins RD. Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog. Science (New York, N.Y.). 315: 1270-4. PMID 17332412 DOI: 10.1126/Science.1138527  1
2007 Weibel DB, Diluzio WR, Whitesides GM. Microfabrication meets microbiology. Nature Reviews. Microbiology. 5: 209-18. PMID 17304250 DOI: 10.1038/Nrmicro1616  1
2007 Siegel AC, Bruzewicz DA, Weibel DB, Whitesides GM. Microsolidics: Fabrication of three-dimensional metallic microstructures in poly(dimethylsiloxane) Advanced Materials. 19: 727-733. DOI: 10.1002/Adma.200601787  1
2006 Weibel DB, Whitesides GM. Applications of microfluidics in chemical biology. Current Opinion in Chemical Biology. 10: 584-91. PMID 17056296 DOI: 10.1016/J.Cbpa.2006.10.016  1
2006 Schroeder FC, del Campo ML, Grant JB, Weibel DB, Smedley SR, Bolton KL, Meinwald J, Eisner T. Pinoresinol: A lignol of plant origin serving for defense in a caterpillar. Proceedings of the National Academy of Sciences of the United States of America. 103: 15497-501. PMID 17030818 DOI: 10.1073/Pnas.0605921103  1
2006 Siegel AC, Shevkoplyas SS, Weibel DB, Bruzewicz DA, Martinez AW, Whitesides GM. Cofabrication of electromagnets and microfluidic systems in poly(dimethylsiloxane). Angewandte Chemie (International Ed. in English). 45: 6877-82. PMID 17001718 DOI: 10.1002/Anie.200602273  1
2006 Weibel DB, Di Luzio WR, Whitesides GM. Harnessing microorganisms to transport microscale loads 3rd Conference On Foundations of Nanoscience: Self-Assembled Architectures and Devices, Fnano 2006. 122-125.  1
2005 Takeuchi S, DiLuzio WR, Weibel DB, Whitesides GM. Controlling the shape of filamentous cells of Escherichia coli. Nano Letters. 5: 1819-23. PMID 16159230 DOI: 10.1021/Nl0507360  1
2005 Weibel DB, Garstecki P, Whitesides GM. Combining microscience and neurobiology. Current Opinion in Neurobiology. 15: 560-7. PMID 16150585 DOI: 10.1016/J.Conb.2005.08.013  1
2005 Weibel DB, Garstecki P, Ryan D, DiLuzio WR, Mayer M, Seto JE, Whitesides GM. Microoxen: microorganisms to move microscale loads. Proceedings of the National Academy of Sciences of the United States of America. 102: 11963-7. PMID 16103369 DOI: 10.1073/Pnas.0505481102  1
2005 Weibel DB, Boulatov R, Lee A, Ferrigno R, Whitesides GM. Modeling the anodic half-cell of a low-temperature coal fuel cell. Angewandte Chemie (International Ed. in English). 44: 5682-6. PMID 16086348 DOI: 10.1002/Anie.200501192  1
2005 Weibel DB, Kruithof M, Potenta S, Sia SK, Lee A, Whitesides GM. Torque-actuated valves for microfluidics. Analytical Chemistry. 77: 4726-33. PMID 16053282 DOI: 10.1021/Ac048303P  1
2005 DiLuzio WR, Turner L, Mayer M, Garstecki P, Weibel DB, Berg HC, Whitesides GM. Escherichia coli swim on the right-hand side. Nature. 435: 1271-4. PMID 15988531 DOI: 10.1038/Nature03660  1
2005 Weibel DB, Lee A, Mayer M, Brady SF, Bruzewicz D, Yang J, Diluzio WR, Clardy J, Whitesides GM. Bacterial printing press that regenerates its ink: contact-printing bacteria using hydrogel stamps. Langmuir : the Acs Journal of Surfaces and Colloids. 21: 6436-42. PMID 15982051 DOI: 10.1021/La047173C  1
2005 Stevens MM, Mayer M, Anderson DG, Weibel DB, Whitesides GM, Langer R. Direct patterning of mammalian cells onto porous tissue engineering substrates using agarose stamps. Biomaterials. 26: 7636-41. PMID 15979701 DOI: 10.1016/J.Biomaterials.2005.05.001  1
2005 Xu S, Nie Z, Seo M, Lewis P, Kumacheva E, Stone HA, Garstecki P, Weibel DB, Gitlin I, Whitesides GM. Generation of monodisperse particles by using microfluidics: control over size, shape, and composition. Angewandte Chemie (International Ed. in English). 44: 724-8. PMID 15612064 DOI: 10.1002/Anie.200462226  1
2005 Takeuchi S, Garstecki P, Weibel DB, Whitesides GM. An axisymmetric flow-focusing microfluidic device Advanced Materials. 17: 1067-1072. DOI: 10.1002/Adma.200401738  1
2005 Weibel DB, Garstecki P, Ryan D, Whitesides GM. Transporting microscale loads with microorganisms Micro Total Analysis Systems - Proceedings of Microtas 2005 Conference: 9th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1: 1564-1566.  1
2004 Schroeder FC, Weibel DB, Meinwald J. Chiral silylation reagents: determining configuration via NMR-spectroscopic coanalysis. Organic Letters. 6: 3019-22. PMID 15330577 DOI: 10.1021/Ol049233B  1
2003 Williamson RT, Barrios Sosa AC, Mitra A, Seaton PJ, Weibel DB, Schroeder FC, Meinwald J, Koehn FE. New silyl ether reagents for the absolute stereochemical determination of secondary alcohols. Organic Letters. 5: 1745-8. PMID 12735767 DOI: 10.1021/Ol034418O  1
2002 Weibel DB, Shevy LE, Schroeder FC, Meinwald J. Synthesis of mayolene-16 and mayolene-18: larval defensive lipids from the European cabbage butterfly. The Journal of Organic Chemistry. 67: 5896-900. PMID 12182619 DOI: 10.1021/Jo011102Q  1
2002 Smedley SR, Schroeder FC, Weibel DB, Meinwald J, Lafleur KA, Renwick JA, Rutowski R, Eisner T. Mayolenes: labile defensive lipids from the glandular hairs of a caterpillar (Pieris rapae). Proceedings of the National Academy of Sciences of the United States of America. 99: 6822-7. PMID 11997469 DOI: 10.1073/Pnas.102165699  1
2001 Weibel DB, Oldham NJ, Feld B, Glombitza G, Dettner K, Boland W. Iridoid biosynthesis in staphylinid rove beetles (Coleoptera: Staphylinidae, Philonthinae). Insect Biochemistry and Molecular Biology. 31: 583-91. PMID 11267897 DOI: 10.1016/S0965-1748(00)00163-6  1
2000 Weibel DB, Walker TR, Schroeder FC, Meinwald J. Chiral silylation reagents for the determination of absolute configuration by NMR spectroscopy. Organic Letters. 2: 2381-3. PMID 10930289 DOI: 10.1021/Ol006162H  1
2000 Weibel DB, Attygalle AB, Shevy LE, Meinwald J. Cycloalkene budding: mass spectrometric studies of competitive and dual cycloalkene extrusion reactions from doubly unsaturated aldehyde N,N-dimethylhydrazones. Rapid Communications in Mass Spectrometry : Rcm. 14: 1105-9. PMID 10867684 DOI: 10.1002/1097-0231(20000715)14:13<1105::Aid-Rcm993>3.0.Co;2-B  1
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