Jake Jaffe, Ph.D. - Publications

Affiliations: 
2004 Harvard University, Cambridge, MA, United States 
Area:
Computational Genetics

23/164 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Mullahoo J, Zhang T, Clauser K, Carr SA, Jaffe JD, Papanastasiou M. "Dual protease type XIII/pepsin digestion offers superior resolution and overlap for the analysis of histone tails by HX-MS". Methods (San Diego, Calif.). PMID 32004545 DOI: 10.1016/j.ymeth.2020.01.016  0.326
2019 Chalkley RJ, MacCoss MJ, Jaffe JD, Röst HL. Initial Guidelines for Manuscripts Employing Data-independent Acquisition Mass Spectrometry for Proteomic Analysis. Molecular & Cellular Proteomics : McP. 18: 1-2. PMID 30602589 DOI: 10.1074/mcp.E118.001286  0.347
2018 Malioutov D, Chen T, Airoldi E, Jaffe J, Budnik B, Slavov N. Quantifying Homologous Proteins and Proteoforms. Molecular & Cellular Proteomics : McP. 18: 162-168. PMID 30282776 DOI: 10.1074/Mcp.Tir118.000947  0.449
2018 Peckner R, Myers SA, Jacome ASV, Egertson JD, Abelin JG, MacCoss MJ, Carr SA, Jaffe JD. Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics. Nature Methods. PMID 29608554 DOI: 10.1038/Nmeth.4643  0.383
2016 Jaffe JD, Feeney CM, Patel J, Lu X, Mani DR. Transitioning from Targeted to Comprehensive Mass Spectrometry Using Genetic Algorithms. Journal of the American Society For Mass Spectrometry. PMID 27562500 DOI: 10.1007/s13361-016-1465-2  0.307
2016 Abelin JG, Patel J, Lu X, Feeney CM, Fagbami L, Creech AL, Hu R, Lam D, Davison D, Pino L, Qiao JW, Kuhn E, Officer A, Li J, Abbatiello S, ... ... Jaffe JD, et al. Reduced-representation phosphosignatures measured by quantitative targeted MS capture cellular states and enable large-scale comparison of drug-induced phenotypes. Molecular & Cellular Proteomics : McP. PMID 26912667 DOI: 10.1074/Mcp.M116.058354  0.312
2016 Dimitrakopoulos L, Prassas I, Diamandis EP, Nesvizhskii A, Kislinger T, Jaffe J, Drabovich A. Proteogenomics: Opportunities and Caveats. Clinical Chemistry. 62: 551-7. PMID 26817480 DOI: 10.1373/Clinchem.2015.247858  0.327
2015 Kroksveen AC, Jaffe JD, Aasebø E, Barsnes H, Bjørlykke Y, Franciotta D, Keshishian H, Myhr KM, Opsahl JA, van Pesch V, Teunissen CE, Torkildsen Ø, Ulvik RJ, Vethe H, Carr SA, et al. Quantitative proteomics suggests decrease in the secretogranin-1 cerebrospinal fluid levels during the disease course of multiple sclerosis. Proteomics. 15: 3361-9. PMID 26152395 DOI: 10.1002/Pmic.201400142  0.356
2015 Svinkina T, Gu H, Silva JC, Mertins P, Qiao J, Fereshetian S, Jaffe JD, Kuhn E, Udeshi ND, Carr SA. Deep, quantitative coverage of the lysine acetylome using novel anti-acetyl-lysine antibodies and an optimized proteomic workflow. Molecular & Cellular Proteomics : McP. PMID 25953088 DOI: 10.1074/Mcp.O114.047555  0.33
2015 Creech AL, Taylor JE, Maier VK, Wu X, Feeney CM, Udeshi ND, Peach SE, Boehm JS, Lee JT, Carr SA, Jaffe JD. Building the Connectivity Map of epigenetics: chromatin profiling by quantitative targeted mass spectrometry. Methods (San Diego, Calif.). 72: 57-64. PMID 25448295 DOI: 10.1016/J.Ymeth.2014.10.033  0.308
2012 Mertins P, Udeshi ND, Clauser KR, Mani DR, Patel J, Ong SE, Jaffe JD, Carr SA. iTRAQ labeling is superior to mTRAQ for quantitative global proteomics and phosphoproteomics. Molecular & Cellular Proteomics : McP. 11: M111.014423. PMID 22210691 DOI: 10.1074/Mcp.M111.014423  0.33
2011 Riddle NC, Minoda A, Kharchenko PV, Alekseyenko AA, Schwartz YB, Tolstorukov MY, Gorchakov AA, Jaffe JD, Kennedy C, Linder-Basso D, Peach SE, Shanower G, Zheng H, Kuroda MI, Pirrotta V, et al. Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin. Genome Research. 21: 147-63. PMID 21177972 DOI: 10.1101/Gr.110098.110  0.504
2010 Tabb DL, Vega-Montoto L, Rudnick PA, Variyath AM, Ham AJ, Bunk DM, Kilpatrick LE, Billheimer DD, Blackman RK, Cardasis HL, Carr SA, Clauser KR, Jaffe JD, Kowalski KA, Neubert TA, et al. Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. Journal of Proteome Research. 9: 761-76. PMID 19921851 DOI: 10.1021/Pr9006365  0.475
2010 Rudnick PA, Clauser KR, Kilpatrick LE, Tchekhovskoi DV, Neta P, Blonder N, Billheimer DD, Blackman RK, Bunk DM, Cardasis HL, Ham AJ, Jaffe JD, Kinsinger CR, Mesri M, Neubert TA, et al. Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses. Molecular & Cellular Proteomics : McP. 9: 225-41. PMID 19837981 DOI: 10.1074/Mcp.M900223-Mcp200  0.429
2009 Rudomin EL, Carr SA, Jaffe JD. Directed sample interrogation utilizing an accurate mass exclusion-based data-dependent acquisition strategy (AMEx). Journal of Proteome Research. 8: 3154-60. PMID 19344186 DOI: 10.1021/pr801017a  0.46
2008 Jaffe JD, Keshishian H, Chang B, Addona TA, Gillette MA, Carr SA. Accurate inclusion mass screening: a bridge from unbiased discovery to targeted assay development for biomarker verification. Molecular & Cellular Proteomics : McP. 7: 1952-62. PMID 18534968 DOI: 10.1074/mcp.M800218-MCP200  0.463
2007 Lindell D, Jaffe JD, Coleman ML, Futschik ME, Axmann IM, Rector T, Kettler G, Sullivan MB, Steen R, Hess WR, Church GM, Chisholm SW. Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature. 449: 83-6. PMID 17805294 DOI: 10.1038/Nature06130  0.378
2006 Jaffe JD, Mani DR, Leptos KC, Church GM, Gillette MA, Carr SA. PEPPeR, a platform for experimental proteomic pattern recognition. Molecular & Cellular Proteomics : McP. 5: 1927-41. PMID 16857664 DOI: 10.1074/Mcp.M600222-Mcp200  0.593
2006 Leptos KC, Sarracino DA, Jaffe JD, Krastins B, Church GM. MapQuant: open-source software for large-scale protein quantification. Proteomics. 6: 1770-82. PMID 16470651 DOI: 10.1002/Pmic.200500201  0.592
2005 Lindell D, Jaffe JD, Johnson ZI, Church GM, Chisholm SW. Photosynthesis genes in marine viruses yield proteins during host infection. Nature. 438: 86-9. PMID 16222247 DOI: 10.1038/Nature04111  0.369
2004 Jaffe JD, Stange-Thomann N, Smith C, DeCaprio D, Fisher S, Butler J, Calvo S, Elkins T, FitzGerald MG, Hafez N, Kodira CD, Major J, Wang S, Wilkinson J, Nicol R, et al. The complete genome and proteome of Mycoplasma mobile. Genome Research. 14: 1447-61. PMID 15289470 DOI: 10.1101/Gr.2674004  0.443
2004 Jaffe JD, Berg HC, Church GM. Proteogenomic mapping as a complementary method to perform genome annotation. Proteomics. 4: 59-77. PMID 14730672 DOI: 10.1002/Pmic.200300511  0.435
2001 Chen T, Jaffe JD, Church GM. Algorithms for identifying protein cross-links via tandem mass spectrometry. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 8: 571-83. PMID 11747613 DOI: 10.1089/106652701753307494  0.534
Low-probability matches (unlikely to be authored by this person)
2013 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA. Integrated proteomic analysis of post-translational modifications by serial enrichment. Nature Methods. 10: 634-7. PMID 23749302 DOI: 10.1038/Nmeth.2518  0.292
2018 Krug K, Mertins P, Zhang B, Hornbeck P, Raju R, Ahmad R, Szucs M, Mundt F, Forestier D, Jane-Valbuena J, Keshishian H, Gillette MA, Tamayo P, Mesirov JP, Jaffe JD, et al. A curated resource for phosphosite-specific signature analysis. Molecular & Cellular Proteomics : McP. PMID 30563849 DOI: 10.1074/Mcp.Tir118.000943  0.28
2020 Shamsaei B, Chojnacki S, Pilarczyk M, Najafabadi M, Niu W, Chen C, Ross K, Matlock A, Muhlich J, Chutipongtanate S, Zheng J, Turner J, Vidović D, Jaffe J, MacCoss M, et al. piNET: a versatile web platform for downstream analysis and visualization of proteomics data. Nucleic Acids Research. PMID 32469073 DOI: 10.1093/Nar/Gkaa436  0.271
2012 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. Molecular & Cellular Proteomics : McP. 11: 148-59. PMID 22505724 DOI: 10.1074/Mcp.M111.016857  0.243
2015 Kwant RL, Jaffe J, Palmere PJ, Francis MB. Controlled levels of protein modification through a chromatography-mediated bioconjugation. Chemical Science. 6: 2596-2601. PMID 28706661 DOI: 10.1039/C4Sc03790A  0.237
2011 Alföldi J, Di Palma F, Grabherr M, Williams C, Kong L, Mauceli E, Russell P, Lowe CB, Glor RE, Jaffe JD, Ray DA, Boissinot S, Shedlock AM, Botka C, Castoe TA, et al. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature. 477: 587-91. PMID 21881562 DOI: 10.1038/Nature10390  0.229
2019 Papanastasiou M, Mullahoo J, DeRuff KC, Bajrami B, Karageorgos I, Johnston SE, Peckner R, Myers SA, Carr SA, Jaffe JD. Chasing tails: Cathepsin-L improves structural analysis of histones by HX-MS. Molecular & Cellular Proteomics : McP. PMID 31409669 DOI: 10.1074/Mcp.Ra119.001325  0.225
2018 Jaffe J, Wucherer K, Sperry JB, Zou Q, Chang Q, Massa MA, Bhattacharya K, Kumar S, Caparon M, Stead D, Wright PA, Dirksen A, Francis MB. Effects of Conformational Changes in Peptide-CRM Vaccines. Bioconjugate Chemistry. PMID 30475601 DOI: 10.1021/Acs.Bioconjchem.8B00661  0.213
2016 Rosenbluh J, Mercer J, Shrestha Y, Oliver R, Tamayo P, Doench JG, Tirosh I, Piccioni F, Hartenian E, Horn H, Fagbami L, Root DE, Jaffe J, Lage K, Boehm JS, et al. Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers. Cell Systems. 3: 302-316.e4. PMID 27684187 DOI: 10.1016/J.Cels.2016.09.001  0.206
2015 Kroksveen AC, Jaffe JD, Aasebø E, Barsnes H, Bjørlykke Y, Franciotta D, Keshishian H, Myhr KM, Opsahl JA, van Pesch V, Teunissen CE, Torkildsen Ø, Ulvik RJ, Vethe H, Carr SA, et al. Quantitative proteomics suggests decrease in the secretogranin-1 cerebrospinal fluid levels during the disease course of multiple sclerosis Proteomics. DOI: 10.1002/pmic.201400142  0.197
2018 Litichevskiy L, Peckner R, Abelin JG, Asiedu JK, Creech AL, Davis JF, Davison D, Dunning CM, Egertson JD, Egri S, Gould J, Ko T, Johnson SA, Lahr DL, Lam D, ... ... Jaffe JD, et al. A Library of Phosphoproteomic and Chromatin Signatures for Characterizing Cellular Responses to Drug Perturbations. Cell Systems. PMID 29655704 DOI: 10.1016/J.Cels.2018.03.012  0.196
2014 Sharma V, Eckels J, Taylor GK, Shulman NJ, Stergachis AB, Joyner SA, Yan P, Whiteaker JR, Halusa GN, Schilling B, Gibson BW, Colangelo CM, Paulovich AG, Carr SA, Jaffe JD, et al. Panorama: a targeted proteomics knowledge base. Journal of Proteome Research. 13: 4205-10. PMID 25102069 DOI: 10.1021/Pr5006636  0.193
2022 Gross SM, Dane MA, Smith RL, Devlin KL, McLean IC, Derrick DS, Mills CE, Subramanian K, London AB, Torre D, Evangelista JE, Clarke DJB, Xie Z, Erdem C, Lyons N, ... ... Jaffe JD, et al. A multi-omic analysis of MCF10A cells provides a resource for integrative assessment of ligand-mediated molecular and phenotypic responses. Communications Biology. 5: 1066. PMID 36207580 DOI: 10.1038/s42003-022-03975-9  0.19
2015 Kwant RL, Jaffe J, Palmere PJ, Francis MB. Controlled levels of protein modification through a chromatography-mediated bioconjugation Chemical Science. 6: 2596-2601. DOI: 10.1039/c4sc03790a  0.185
2018 Sharma V, Eckels J, Schilling B, Ludwig C, Jaffe JD, MacCoss MJ, MacLean B. Panorama Public: A public repository for quantitative data sets processed in Skyline. Molecular & Cellular Proteomics : McP. PMID 29487113 DOI: 10.1074/Mcp.Ra117.000543  0.182
2012 Peach SE, Rudomin EL, Udeshi ND, Carr SA, Jaffe JD. Quantitative assessment of chromatin immunoprecipitation grade antibodies directed against histone modifications reveals patterns of co-occurring marks on histone protein molecules. Molecular & Cellular Proteomics : McP. 11: 128-37. PMID 22442256 DOI: 10.1074/Mcp.M111.015941  0.17
2016 Gopal S, Creech A, Officer A, Egri S, Davison D, Jaffe JD, Jaffe IZ. The Impact of Chemotherapeutic Agents on Signaling and Epigenetics in Vascular Endothelial Cells Blood. 128: 1353-1353. DOI: 10.1182/blood.v128.22.1353.1353  0.169
2013 Jaffe JD, Wang Y, Chan HM, Zhang J, Huether R, Kryukov GV, Bhang HE, Taylor JE, Hu M, Englund NP, Yan F, Wang Z, Robert McDonald E, Wei L, Ma J, et al. Global chromatin profiling reveals NSD2 mutations in pediatric acute lymphoblastic leukemia. Nature Genetics. 45: 1386-91. PMID 24076604 DOI: 10.1038/Ng.2777  0.163
2018 Keenan AB, Jenkins SL, Jagodnik KM, Koplev S, He E, Torre D, Wang Z, Dohlman AB, Silverstein MC, Lachmann A, Kuleshov MV, Ma'ayan A, Stathias V, Terryn R, Cooper D, ... ... Jaffe JD, et al. The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations. Cell Systems. 6: 13-24. PMID 29199020 DOI: 10.1016/J.Cels.2017.11.001  0.155
2017 Chakraborty AA, Nakamura E, Qi J, Creech A, Jaffe JD, Paulk J, Novak JS, Nagulapalli K, McBrayer SK, Cowley GS, Pineda J, Song J, Wang YE, Carr SA, Root DE, et al. HIF activation causes synthetic lethality between the VHL tumor suppressor and the EZH1 histone methyltransferase. Science Translational Medicine. 9. PMID 28701475 DOI: 10.1126/Scitranslmed.Aal5272  0.151
2015 Maier VK, Feeney CM, Taylor JE, Creech AL, Qiao JW, Szanto A, Das PP, Chevrier N, Cifuentes-Rojas C, Orkin SH, Carr SA, Jaffe JD, Mertins P, Lee JT. Functional Proteomic Analysis of Repressive Histone Methyltransferase Complexes Reveals ZNF518B as a G9A Regulator. Molecular & Cellular Proteomics : McP. 14: 1435-46. PMID 25680957 DOI: 10.1074/Mcp.M114.044586  0.149
2018 Li T, Kim A, Rosenbluh J, Horn H, Greenfeld L, An D, Zimmer A, Liberzon A, Bistline J, Natoli T, Li Y, Tsherniak A, Narayan R, Subramanian A, Liefeld T, ... ... Jaffe J, et al. GeNets: a unified web platform for network-based genomic analyses. Nature Methods. PMID 29915188 DOI: 10.1038/S41592-018-0039-6  0.141
2015 Briseño-Avena C, Roberts PLD, Franks PJS, Jaffe JS. ZOOPS- O2: A broadband echosounder with coordinated stereo optical imaging for observing plankton in situ Methods in Oceanography. 12: 36-54. DOI: 10.1016/J.Mio.2015.07.001  0.139
2012 Abdel-Wahab O, Adli M, LaFave LM, Gao J, Hricik T, Shih AH, Pandey S, Patel JP, Chung YR, Koche R, Perna F, Zhao X, Taylor JE, Park CY, Carroll M, ... ... Jaffe JD, et al. ASXL1 mutations promote myeloid transformation through loss of PRC2-mediated gene repression. Cancer Cell. 22: 180-93. PMID 22897849 DOI: 10.1016/J.Ccr.2012.06.032  0.138
2023 Pintacuda G, Hsu YH, Tsafou K, Li KW, Martín JM, Riseman J, Biagini JC, Ching JKT, Mena D, Gonzalez-Lozano MA, Egri SB, Jaffe J, Smit AB, Fornelos N, Eggan KC, et al. Protein interaction studies in human induced neurons indicate convergent biology underlying autism spectrum disorders. Cell Genomics. 3: 100250. PMID 36950384 DOI: 10.1016/j.xgen.2022.100250  0.134
2018 Javasky E, Shamir I, Gandhi S, Egri S, Sandler O, Rothbart SB, Kaplan N, Jaffe JD, Goren A, Simon I. Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns. Genome Research. PMID 30166406 DOI: 10.1101/Gr.230300.117  0.133
2010 Jaffe JS. Enhanced extended range underwater imaging via structured illumination. Optics Express. 18: 12328-40. PMID 20588358 DOI: 10.1364/Oe.18.012328  0.13
2014 Lassen KG, Kuballa P, Conway KL, Patel KK, Becker CE, Peloquin JM, Villablanca EJ, Norman JM, Liu TC, Heath RJ, Becker ML, Fagbami L, Horn H, Mercer J, Yilmaz OH, ... Jaffe JD, et al. Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense. Proceedings of the National Academy of Sciences of the United States of America. 111: 7741-6. PMID 24821797 DOI: 10.1073/Pnas.1407001111  0.127
2011 Jaffe JS, Roberts PL. Estimating fish orientation from broadband, limited-angle, multiview, acoustic reflections. The Journal of the Acoustical Society of America. 129: 670-80. PMID 21361426 DOI: 10.1121/1.3523430  0.126
2014 Olson DE, Udeshi ND, Wolfson NA, Pitcairn CA, Sullivan ED, Jaffe JD, Svinkina T, Natoli T, Lu X, Paulk J, McCarren P, Wagner FF, Barker D, Howe E, Lazzaro F, et al. An unbiased approach to identify endogenous substrates of "histone" deacetylase 8. Acs Chemical Biology. 9: 2210-6. PMID 25089360 DOI: 10.1021/Cb500492R  0.126
2019 Ghandi M, Huang FW, Jané-Valbuena J, Kryukov GV, Lo CC, McDonald ER, Barretina J, Gelfand ET, Bielski CM, Li H, Hu K, Andreev-Drakhlin AY, Kim J, Hess JM, Haas BJ, ... ... Jaffe JD, et al. Next-generation characterization of the Cancer Cell Line Encyclopedia. Nature. PMID 31068700 DOI: 10.1038/S41586-019-1186-3  0.125
2015 Valinsky L, Jaffe J, Keller N, Block C, Abramson N, Stein-Zamir C. A cluster of invasive meningococcal disease revealed by the characterization of a novel serogroup B meningococcal clone. Epidemiology and Infection. 1-6. PMID 26113514 DOI: 10.1017/S0950268815001296  0.121
2011 De Champfleur NM, Langlois C, Ankenbrandt WJ, Le Bars E, Leroy MA, Duffau H, Bonafé A, Jaffe J, Awad IA, Labauge P. Magnetic resonance imaging evaluation of cerebral cavernous malformations with susceptibility-weighted imaging Neurosurgery. 68: 641-647. PMID 21164377 DOI: 10.1227/NEU.0b013e31820773cf  0.12
2009 Markljung E, Jiang L, Jaffe JD, Mikkelsen TS, Wallerman O, Larhammar M, Zhang X, Wang L, Saenz-Vash V, Gnirke A, Lindroth AM, Barrés R, Yan J, Strömberg S, De S, et al. ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth. Plos Biology. 7: e1000256. PMID 20016685 DOI: 10.1371/Journal.Pbio.1000256  0.118
2015 Jaffe JS. Underwater Optical Imaging: The Past, the Present, and the Prospects Ieee Journal of Oceanic Engineering. 40: 683-700. DOI: 10.1109/Joe.2014.2350751  0.117
2005 Kusumoto A, Seto S, Jaffe JD, Miyata M. Cell surface differentiation of Mycoplasma mobile visualized by surface protein localization. Microbiology (Reading, England). 150: 4001-8. PMID 15583153 DOI: 10.1099/mic.0.27436-0  0.113
2014 Haag JM, Roberts PL, Papen GC, Jaffe JS, Li L, Stramski D. Deep-sea low-light radiometer system. Optics Express. 22: 30074-91. PMID 25606937 DOI: 10.1364/Oe.22.030074  0.112
2008 Roberts PL, Jaffe JS. Classification of live, untethered zooplankton from observations of multiple-angle acoustic scatter. The Journal of the Acoustical Society of America. 124: 796-802. PMID 18681572 DOI: 10.1121/1.2945114  0.112
2023 Hsu YH, Pintacuda G, Liu R, Nacu E, Kim A, Tsafou K, Petrossian N, Crotty W, Suh JM, Riseman J, Martin JM, Biagini JC, Mena D, Ching JKT, Malolepsza E, ... ... Jaffe J, et al. Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia. Iscience. 26: 106701. PMID 37207277 DOI: 10.1016/j.isci.2023.106701  0.111
2015 Xu J, Shao Z, Li D, Xie H, Kim W, Huang J, Taylor JE, Pinello L, Glass K, Jaffe JD, Yuan GC, Orkin SH. Developmental control of polycomb subunit composition by GATA factors mediates a switch to non-canonical functions. Molecular Cell. 57: 304-16. PMID 25578878 DOI: 10.1016/J.Molcel.2014.12.009  0.11
2012 Ku M, Jaffe JD, Koche RP, Rheinbay E, Endoh M, Koseki H, Carr SA, Bernstein BE. H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions. Genome Biology. 13: R85. PMID 23034477 DOI: 10.1186/Gb-2012-13-10-R85  0.109
2011 Li L, Boniecki MT, Jaffe JD, Imai BS, Yau PM, Luthey-Schulten ZA, Martinis SA. Naturally occurring aminoacyl-tRNA synthetases editing-domain mutations that cause mistranslation in Mycoplasma parasites. Proceedings of the National Academy of Sciences of the United States of America. 108: 9378-83. PMID 21606343 DOI: 10.1073/Pnas.1016460108  0.109
2010 Li W, Jaffe JS. Sizing homogeneous spherical particles from intensity-only angular scatter. Journal of the Optical Society of America. a, Optics, Image Science, and Vision. 27: 151-8. PMID 20126224 DOI: 10.1364/Josaa.27.000151  0.108
2013 Michael-Gayego A, Dan-Goor M, Jaffe J, Hidalgo-Grass C, Moses AE. Characterization of sil in invasive group A and G streptococci: antibodies against bacterial pheromone peptide SilCR result in severe infection. Infection and Immunity. 81: 4121-7. PMID 23980111 DOI: 10.1128/IAI.00359-13  0.108
2016 Surface LE, Fields PA, Subramanian V, Behmer R, Udeshi N, Peach SE, Carr SA, Jaffe JD, Boyer LA. H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs. Cell Reports. PMID 26804911 DOI: 10.1016/J.Celrep.2015.12.100  0.106
2019 Bandopadhayay P, Piccioni F, O'Rourke R, Ho P, Gonzalez EM, Buchan G, Qian K, Gionet G, Girard E, Coxon M, Rees MG, Brenan L, Dubois F, Shapira O, Greenwald NF, ... ... Jaffe JD, et al. Neuronal differentiation and cell-cycle programs mediate response to BET-bromodomain inhibition in MYC-driven medulloblastoma. Nature Communications. 10: 2400. PMID 31160565 DOI: 10.1038/S41467-019-10307-9  0.104
2013 Smith SM, Dart RC, Katz NP, Paillard F, Adams EH, Comer SD, Degroot A, Edwards RR, Haddox JD, Jaffe JH, Jones CM, Kleber HD, Kopecky EA, Markman JD, Montoya ID, et al. Classification and definition of misuse, abuse, and related events in clinical trials: ACTTION systematic review and recommendations. Pain. 154: 2287-96. PMID 23792283 DOI: 10.1016/J.Pain.2013.05.053  0.103
2006 Frias MA, Thoreen CC, Jaffe JD, Schroder W, Sculley T, Carr SA, Sabatini DM. mSin1 is necessary for Akt/PKB phosphorylation, and its isoforms define three distinct mTORC2s. Current Biology : Cb. 16: 1865-70. PMID 16919458 DOI: 10.1016/j.cub.2006.08.001  0.094
2014 Lane AA, Chapuy B, Lin CY, Tivey T, Li H, Townsend EC, van Bodegom D, Day TA, Wu SC, Liu H, Yoda A, Alexe G, Schinzel AC, Sullivan TJ, Malinge S, ... ... Jaffe JD, et al. Triplication of a 21q22 region contributes to B cell transformation through HMGN1 overexpression and loss of histone H3 Lys27 trimethylation. Nature Genetics. 46: 618-23. PMID 24747640 DOI: 10.1038/Ng.2949  0.094
2020 Shu S, Wu HJ, Ge JY, Zeid R, Harris IS, Jovanović B, Murphy K, Wang B, Qiu X, Endress JE, Reyes J, Lim K, Font-Tello A, Syamala S, Xiao T, ... ... Jaffe JD, et al. Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer. Molecular Cell. PMID 32416067 DOI: 10.1016/J.Molcel.2020.04.027  0.094
2019 Barbie TU, Ritter JL, Zhu Z, Thai TC, Mahadevan NR, Mertins P, Knelson EH, Piel BP, Han S, Jaffe JD, Carr SA, Barbie DA. Phosphorylation of RAB7 by TBK1/IKKε Regulates Innate Immune Signaling in Triple Negative Breast Cancer. Cancer Research. PMID 31662325 DOI: 10.1158/0008-5472.Can-19-1310  0.093
2011 Schwartz RP, Kelly SM, O'Grady KE, Gandhi D, Jaffe JH. Interim methadone treatment compared to standard methadone treatment: 4-month findings. Journal of Substance Abuse Treatment. 41: 21-9. PMID 21353445 DOI: 10.1016/j.jsat.2011.01.008  0.093
2015 Chou DH, Vetere A, Choudhary A, Scully SS, Schenone M, Tang A, Gomez R, Burns SM, Lundh M, Vital T, Comer E, Faloon PW, Dan?ík V, Ciarlo C, Paulk J, ... ... Jaffe J, et al. Kinase-Independent Small-Molecule Inhibition of JAK-STAT Signaling. Journal of the American Chemical Society. 137: 7929-34. PMID 26042473 DOI: 10.1021/Jacs.5B04284  0.092
2004 Jaffe JD, Miyata M, Berg HC. Energetics of gliding motility in Mycoplasma mobile. Journal of Bacteriology. 186: 4254-61. PMID 15205428 DOI: 10.1128/JB.186.13.4254-4261.2004  0.087
2009 Schwartz RP, Jaffe JH, O'Grady KE, Das B, Highfield DA, Wilson ME. Scaling-up interim methadone maintenance: treatment for 1,000 heroin-addicted individuals. Journal of Substance Abuse Treatment. 37: 362-7. PMID 19540702 DOI: 10.1016/J.Jsat.2009.04.002  0.087
2015 Monico LB, Gryczynski J, Mitchell SG, Schwartz RP, O'Grady KE, Jaffe JH. Buprenorphine treatment and 12-step meeting attendance: conflicts, compatibilities, and patient outcomes. Journal of Substance Abuse Treatment. PMID 25986647 DOI: 10.1016/j.jsat.2015.05.005  0.086
2018 Hinohara K, Wu HJ, Vigneau S, McDonald TO, Igarashi KJ, Yamamoto KN, Madsen T, Fassl A, Egri SB, Papanastasiou M, Ding L, Peluffo G, Cohen O, Kales SC, Lal-Nag M, ... ... Jaffe JD, et al. KDM5 Histone Demethylase Activity Links Cellular Transcriptomic Heterogeneity to Therapeutic Resistance. Cancer Cell. PMID 30472020 DOI: 10.1016/J.Ccell.2018.10.014  0.085
2012 Spinella PC, Reddy HL, Jaffe JS, Cap AP, Goodrich RP. Fresh whole blood use for hemorrhagic shock: preserving benefit while avoiding complications. Anesthesia and Analgesia. 115: 751-8. PMID 22763908 DOI: 10.1213/ANE.0b013e318261f40e  0.085
2015 Monico LB, Mitchell SG, Gryczynski J, Schwartz RP, O'Grady KE, Olsen YK, Jaffe JH. Prior experience with non-prescribed buprenorphine: Role in treatment entry and retention. Journal of Substance Abuse Treatment. PMID 25980599 DOI: 10.1016/j.jsat.2015.04.010  0.083
2019 Chakraborty AA, Laukka T, Myllykoski M, Ringel AE, Booker MA, Tolstorukov MY, Meng YJ, Meier SR, Jennings RB, Creech AL, Herbert ZT, McBrayer SK, Olenchock BA, Jaffe JD, Haigis MC, et al. Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate. Science (New York, N.Y.). 363: 1217-1222. PMID 30872525 DOI: 10.1126/Science.Aaw1026  0.082
2010 Zhang Y, Ali TZ, Zhou H, D'Souza DR, Lu Y, Jaffe J, Liu Z, Passaniti A, Hamburger AW. ErbB3 binding protein 1 represses metastasis-promoting gene anterior gradient protein 2 in prostate cancer. Cancer Research. 70: 240-8. PMID 20048076 DOI: 10.1158/0008-5472.Can-09-2904  0.082
2015 Taniguchi DA, Gagnon Y, Wheeler BR, Johnsen S, Jaffe JS. Cuttlefish Sepia officinalis Preferentially Respond to Bottom Rather than Side Stimuli When Not Allowed Adjacent to Tank Walls. Plos One. 10: e0138690. PMID 26465786 DOI: 10.1371/Journal.Pone.0138690  0.081
2011 Gryczynski J, Schwartz RP, Salkever DS, Mitchell SG, Jaffe JH. Patterns in admission delays to outpatient methadone treatment in the United States. Journal of Substance Abuse Treatment. 41: 431-9. PMID 21821378 DOI: 10.1016/j.jsat.2011.06.005  0.081
2017 Horwitz SM, Koch R, Porcu P, Oki Y, Moskowitz A, Perez M, Myskowski P, Officer A, Jaffe JD, Morrow SN, Allen K, Douglas M, Stern H, Sweeney J, Kelly P, et al. Activity of the PI3K-δ,γ inhibitor duvelisib in a phase I trial and preclinical models of T-cell lymphoma. Blood. PMID 29233821 DOI: 10.1182/Blood-2017-08-802470  0.081
2015 Pepper RE, Jaffe JS, Variano E, Koehl MAR. Zooplankton in flowing water near benthic communities encounter rapidly fluctuating velocity gradients and accelerations Marine Biology. 162: 1939-1954. DOI: 10.1007/S00227-015-2713-X  0.079
2012 Luo T, Masson K, Jaffe JD, Silkworth W, Ross NT, Scherer CA, Scholl C, Fröhling S, Carr SA, Stern AM, Schreiber SL, Golub TR. STK33 kinase inhibitor BRD-8899 has no effect on KRAS-dependent cancer cell viability. Proceedings of the National Academy of Sciences of the United States of America. 109: 2860-5. PMID 22323609 DOI: 10.1073/Pnas.1120589109  0.078
2014 Jaffe JA. Custom, identity, and the jury in India, 1800-1832 Historical Journal. 57: 131-155. DOI: 10.1017/S0018246X13000435  0.078
2013 Haag JM, Jaffe JS, Sweeney AM. Measurement system for marine animal reflectance functions. Optics Express. 21: 3603-16. PMID 23481817 DOI: 10.1364/Oe.21.003603  0.077
2013 Gryczynski J, Mitchell SG, Jaffe JH, Kelly SM, Myers CP, O'Grady KE, Olsen YK, Schwartz RP. Retention in methadone and buprenorphine treatment among African Americans. Journal of Substance Abuse Treatment. 45: 287-92. PMID 23566446 DOI: 10.1016/j.jsat.2013.02.008  0.073
2012 Abdel-Wahab O, Gao J, Adli M, Chung YR, Koche R, Shih AH, Pandey S, La-Fave LM, Ndiaye-Lobry D, Shin YS, Bhatt PK, Patel JP, Zhao X, Park CY, Jaffe JD, et al. Conditional Deletion of Asxl1 Results in Myelodysplasia Blood. 120: 308-308. DOI: 10.1182/Blood.V120.21.308.308  0.073
2014 Schwartz RP, Alexandre PK, Kelly SM, O'Grady KE, Gryczynski J, Jaffe JH. Interim versus standard methadone treatment: a benefit-cost analysis. Journal of Substance Abuse Treatment. 46: 306-14. PMID 24239030 DOI: 10.1016/j.jsat.2013.10.003  0.071
2009 Schwartz RP, Jaffe JH, O'Grady KE, Kinlock TW, Gordon MS, Kelly SM, Wilson ME, Ahmed A. Interim methadone treatment: impact on arrests. Drug and Alcohol Dependence. 103: 148-54. PMID 19443133 DOI: 10.1016/J.Drugalcdep.2009.03.007  0.071
2014 Jaffe J. Web at 25, W3C at 20: An opportunity to reflect and look to the future Ieee Internet Computing. 18: 74-78. DOI: 10.1109/MIC.2014.78  0.068
2013 Kelly SM, Oʼgrady KE, Jaffe JH, Gandhi D, Schwartz RP. Improvements in outcomes in methadone patients on probation/parole regardless of counseling early in treatment. Journal of Addiction Medicine. 7: 133-8. PMID 23455877 DOI: 10.1097/ADM.0b013e318284a0c1  0.068
2008 Beebe B, Badalamenti A, Jaffe J, Feldstein S, Marquette L, Helbraun E, Demetri-Friedman D, Flaster C, Goodman P, Kaminer T, Kaufman-Balamuth L, Putterman J, Stepakoff S, Ellman L. Distressed mothers and their infants use a less efficient timing mechanism in creating expectancies of each other's looking patterns. Journal of Psycholinguistic Research. 37: 293-307. PMID 18521751 DOI: 10.1007/S10936-008-9078-Y  0.067
2015 Mitchell SG, Gryczynski J, Schwartz RP, Myers CP, O'Grady KE, Olsen YK, Jaffe JH. Changes in Quality of Life following Buprenorphine Treatment: Relationship with Treatment Retention and Illicit Opioid Use. Journal of Psychoactive Drugs. 47: 149-57. PMID 25950595 DOI: 10.1080/02791072.2015.1014948  0.067
2014 Mitchell SG, Gryczynski J, Kelly SM, O'Grady KE, Jaffe JH, Olsen YK, Schwartz RP. Treatment Outcomes of African American Buprenorphine Patients by Parole and Probation Status. Journal of Drug Issues. 44: 69-82. PMID 25364037 DOI: 10.1177/0022042613491106  0.063
2019 Hinohara K, Wu HJ, Sébastien Vigneau, McDonald TO, Igarashi KJ, Yamamoto KN, Madsen T, Fassl A, Egri SB, Papanastasiou M, Ding L, Peluffo G, Cohen O, Kales SC, Lal-Nag M, ... ... Jaffe JD, et al. KDM5 Histone Demethylase Activity Links Cellular Transcriptomic Heterogeneity to Therapeutic Resistance. Cancer Cell. 35: 330-332. PMID 30753830 DOI: 10.1016/j.ccell.2019.01.012  0.063
2013 Jaffe J, Pedersen D, Voetmann T. Skill differences in corporate acquisitions Journal of Corporate Finance. 23: 166-181. DOI: 10.1016/j.jcorpfin.2013.08.007  0.063
2014 Berdalet E, McManus MA, Ross ON, Burchard H, Chavez FP, Jaffe JS, Jenkinson IR, Kudela R, Lips I, Lips U, Lucas A, Rivas D, Ruiz-de la Torre MC, Ryan J, Sullivan JM, et al. Understanding harmful algae in stratified systems: Review of progress and future directions Deep-Sea Research Part Ii: Topical Studies in Oceanography. 101: 4-20. DOI: 10.1016/J.Dsr2.2013.09.042  0.063
2012 Sawaya RA, Jaffe J, Friedenberg L, Friedenberg FK. Vitamin, mineral, and drug absorption following bariatric surgery. Current Drug Metabolism. 13: 1345-55. PMID 22746302 DOI: 10.2174/138920012803341339  0.062
2010 Beebe B, Jaffe J, Markese S, Buck K, Chen H, Cohen P, Bahrick L, Andrews H, Feldstein S. The origins of 12-month attachment: a microanalysis of 4-month mother-infant interaction. Attachment & Human Development. 12: 3-141. PMID 20390524 DOI: 10.1080/14616730903338985  0.061
2014 Schiff M, Jaffe J, Freundlich B, Madsen P. New autoinjector technology for the delivery of subcutaneous methotrexate in the treatment of rheumatoid arthritis. Expert Review of Medical Devices. 11: 447-55. PMID 24934630 DOI: 10.1586/17434440.2014.929492  0.061
2012 Schwartz RP, Kelly SM, O'Grady KE, Gandhi D, Jaffe JH. Randomized trial of standard methadone treatment compared to initiating methadone without counseling: 12-month findings. Addiction (Abingdon, England). 107: 943-52. PMID 22029398 DOI: 10.1111/j.1360-0443.2011.03700.x  0.061
2015 Jaffe J, Jindra J, Pedersen D, Voetmann T. Returns to acquirers of public and subsidiary targets Journal of Corporate Finance. 31: 246-270. DOI: 10.1016/J.Jcorpfin.2015.02.005  0.058
2015 Schwartz RP, Kelly SM, Gryczynski J, Mitchell SG, O'Grady KE, Jaffe JH. Heroin use, HIV-risk, and criminal behavior in Baltimore: Findings from Clinical Research. Journal of Addictive Diseases. 0. PMID 26079104 DOI: 10.1080/10550887.2015.1059222  0.057
2013 Mitchell SG, Gryczynski J, Schwartz RP, O'Grady KE, Olsen YK, Jaffe JH. A randomized trial of intensive outpatient (IOP) vs. standard outpatient (OP) buprenorphine treatment for African Americans. Drug and Alcohol Dependence. 128: 222-9. PMID 22999817 DOI: 10.1016/j.drugalcdep.2012.08.027  0.057
2012 Greulich H, Kaplan B, Mertins P, Chen TH, Tanaka KE, Yun CH, Zhang X, Lee SH, Cho J, Ambrogio L, Liao R, Imielinski M, Banerji S, Berger AH, Lawrence MS, ... ... Jaffe JD, et al. Functional analysis of receptor tyrosine kinase mutations in lung cancer identifies oncogenic extracellular domain mutations of ERBB2. Proceedings of the National Academy of Sciences of the United States of America. 109: 14476-81. PMID 22908275 DOI: 10.1073/Pnas.1203201109  0.055
2008 Castellucci SA, Curcillo PG, Ginsberg PC, Saba SC, Jaffe JS, Harmon JD. Single port access adrenalectomy. Journal of Endourology / Endourological Society. 22: 1573-6. PMID 18681804 DOI: 10.1089/end.2008.0100  0.054
2013 Jaffe JE, Kaspar TC, Droubay TC, Varga T. Band offsets for mismatched interfaces: The special case of ZnO on CdTe (001) Journal of Vacuum Science and Technology a: Vacuum, Surfaces and Films. 31. DOI: 10.1116/1.4816951  0.052
2009 Jaffe J, AlKhawam L, Du H, Tobin K, O'Leary J, Pollock G, Batjer HH, Awad IA. Outcome predictors and spectrum of treatment eligibility with prospective protocolized management of intracerebral hemorrhage. Neurosurgery. 64: 436-45; discussion 4. PMID 19240605 DOI: 10.1227/01.NEU.0000330402.20883.1B  0.052
2011 Tucker EJ, Hershman SG, Köhrer C, Belcher-Timme CA, Patel J, Goldberger OA, Christodoulou J, Silberstein JM, McKenzie M, Ryan MT, Compton AG, Jaffe JD, Carr SA, Calvo SE, RajBhandary UL, et al. Mutations in MTFMT underlie a human disorder of formylation causing impaired mitochondrial translation. Cell Metabolism. 14: 428-34. PMID 21907147 DOI: 10.1016/J.Mito.2012.07.084  0.052
2014 Finton KA, Friend D, Jaffe J, Gewe M, Holmes MA, Larman HB, Stuart A, Larimore K, Greenberg PD, Elledge SJ, Stamatatos L, Strong RK. Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10. Plos Pathogens. 10: e1004403. PMID 25254371 DOI: 10.1371/Journal.Ppat.1004403  0.051
2009 Gryczysnki J, Schwartz R, O'Grady K, Jaffe J. Dropout from interim methadone and subsequent comprehensive methadone maintenance. The American Journal of Drug and Alcohol Abuse. 35: 394-398. PMID 22053122 DOI: 10.3109/00952990903322865  0.051
2014 Gryczynski J, Mitchell SG, Jaffe JH, O'Grady KE, Olsen YK, Schwartz RP. Leaving buprenorphine treatment: patients' reasons for cessation of care. Journal of Substance Abuse Treatment. 46: 356-61. PMID 24238714 DOI: 10.1016/j.jsat.2013.10.004  0.051
2014 Yi J, Mirza D, Kastner R, Schurgers C, Roberts P, Jaffe J. ToA-TS: Time of arrival based joint time synchronization and tracking for mobile underwater systems Ad Hoc Networks. DOI: 10.1016/j.adhoc.2014.10.010  0.05
2012 Keller D, Jaffe J, Philp MM, Haluszka O, Khanna A. Should all endoscopically excised rectal polyps be tattooed? A plea for localization. Surgical Endoscopy. 26: 3101-5. PMID 22692461 DOI: 10.1007/s00464-012-2346-9  0.048
2012 Kapitsinou PP, Jaffe J, Michael M, Swan CE, Duffy KJ, Erickson-Miller CL, Haase VH. Preischemic targeting of HIF prolyl hydroxylation inhibits fibrosis associated with acute kidney injury. American Journal of Physiology. Renal Physiology. 302: F1172-9. PMID 22262480 DOI: 10.1152/Ajprenal.00667.2011  0.048
2012 Beebe B, Lachmann F, Markese S, Buck KA, Bahrick LE, Chen H, Cohen P, Andrews H, Feldstein S, Jaffe J. On the Origins of Disorganized Attachment and Internal Working Models: Paper II. An Empirical Microanalysis of 4-Month Mother-Infant Interaction. Psychoanalytic Dialogues. 22: 352-374. PMID 23066334 DOI: 10.1080/10481885.2012.679606  0.047
2013 Jaffe JS, Franks PJS, Briseño-Avena C, Roberts PLD, Laxton B. Advances in underwater fluorometry: From bulk fluorescence to planar laser imaging Subsea Optics and Imaging. 536-549. DOI: 10.1533/9780857093523.3.536  0.046
2013 Jaffe JS. A contemporary perspective on underwater optical imaging Oceans 2013 Mts/Ieee Bergen: the Challenges of the Northern Dimension. DOI: 10.1109/OCEANS-Bergen.2013.6608120  0.046
2013 Gryczynski J, Jaffe JH, Schwartz RP, DuÅ¡ek KA, Gugsa N, Monroe CL, O'Grady KE, Olsen YK, Mitchell SG. Patient perspectives on choosing buprenorphine over methadone in an urban, equal-access system. The American Journal On Addictions / American Academy of Psychiatrists in Alcoholism and Addictions. 22: 285-91. PMID 23617873 DOI: 10.1111/j.1521-0391.2012.12004.x  0.046
2013 Jaffe JS. A historical perspective on underwater optical imaging Oceans 2013 Mts/Ieee Bergen: the Challenges of the Northern Dimension. DOI: 10.1109/OCEANS-Bergen.2013.6608121  0.045
2019 Labbé DP, Zadra G, Yang M, Reyes JM, Lin CY, Cacciatore S, Ebot EM, Creech AL, Giunchi F, Fiorentino M, Elfandy H, Syamala S, Karoly ED, Alshalalfa M, Erho N, ... ... Jaffe JD, et al. High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program. Nature Communications. 10: 4358. PMID 31554818 DOI: 10.1038/S41467-019-12298-Z  0.044
2012 Mitchell SG, Kelly SM, Gryczynski J, Myers CP, Jaffe JH, O'Grady KE, Olsen YK, Schwartz RP. African American patients seeking treatment in the public sector: characteristics of buprenorphine vs. methadone patients. Drug and Alcohol Dependence. 122: 55-60. PMID 21962726 DOI: 10.1016/j.drugalcdep.2011.09.009  0.044
2012 Burden AR, Torjman MC, Dy GE, Jaffe JD, Littman JJ, Nawar F, Rajaram SS, Schorr C, Staman GW, Reboli AC. Prevention of central venous catheter-related bloodstream infections: is it time to add simulation training to the prevention bundle? Journal of Clinical Anesthesia. 24: 555-60. PMID 23101770 DOI: 10.1016/j.jclinane.2012.04.006  0.042
2015 Vocci FJ, Schwartz RP, Wilson ME, Gordon MS, Kinlock TW, Fitzgerald TT, O'Grady KE, Jaffe JH. Buprenorphine dose induction in non-opioid-tolerant pre-release prisoners. Drug and Alcohol Dependence. PMID 26409751 DOI: 10.1016/J.Drugalcdep.2015.09.001  0.041
2010 Wilson ME, Schwartz RP, O'Grady KE, Jaffe JH. Impact of interim methadone maintenance on HIV risk behaviors. Journal of Urban Health : Bulletin of the New York Academy of Medicine. 87: 586-91. PMID 20386992 DOI: 10.1007/S11524-010-9451-7  0.041
2013 Block C, Ergaz-Shaltiel Z, Valinsky L, Temper V, Hidalgo-Grass C, Minster N, Weissman C, Benenson S, Jaffe J, Moses AE, Bar-Oz B. Déjà vu: Ralstonia mannitolilytica infection associated with a humidifying respiratory therapy device, Israel, June to July 2011. Euro Surveillance : Bulletin EuropéEn Sur Les Maladies Transmissibles = European Communicable Disease Bulletin. 18: 20471. PMID 23725776  0.04
2014 Freundlich B, Kivitz A, Jaffe JS. Nearly pain-free self-administration of subcutaneous methotrexate with an autoinjector: results of a phase 2 clinical trial in patients with rheumatoid arthritis who have functional limitations. Journal of Clinical Rheumatology : Practical Reports On Rheumatic & Musculoskeletal Diseases. 20: 256-60. PMID 25036562 DOI: 10.1097/RHU.0000000000000117  0.039
2014 Elinav H, Hershko-Klement A, Valinsky L, Jaffe J, Wiseman A, Shimon H, Braun E, Paitan Y, Block C, Sorek R, Nir-Paz R. Pregnancy-associated listeriosis: clinical characteristics and geospatial analysis of a 10-year period in Israel. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 59: 953-61. PMID 24973315 DOI: 10.1093/Cid/Ciu504  0.038
2009 Gryczynski J, Schwartz R, O'Grady K, Jaffe J. Treatment entry among individuals on a waiting list for methadone maintenance. The American Journal of Drug and Alcohol Abuse. 35: 290-4. PMID 19579092 DOI: 10.1080/00952990902968577  0.038
2012 Dey M, Jaffe J, Stadnik A, Awad IA. External ventricular drainage for intraventricular hemorrhage. Current Neurology and Neuroscience Reports. 12: 24-33. PMID 22002766 DOI: 10.1007/s11910-011-0231-x  0.038
2014 Schiff MH, Jaffe JS, Freundlich B. Response to: 'is there a direct relationship between serum level of methotrexate and clinical efficacy and tolerability?' by Fleishman and Yazici. Annals of the Rheumatic Diseases. 73: e55. PMID 24962874 DOI: 10.1136/annrheumdis-2014-205938  0.037
2015 Bershad AK, Jaffe JH, Childs E, de Wit H. Opioid partial agonist buprenorphine dampens responses to psychosocial stress in humans. Psychoneuroendocrinology. 52: 281-8. PMID 25544740 DOI: 10.1016/J.Psyneuen.2014.12.004  0.037
2011 Beebe B, Steele M, Jaffe J, Buck KA, Chen H, Cohen P, Kaitz M, Markese S, Andrews H, Margolis A, Feldstein S. MATERNAL ANXIETY SYMPTOMS AND MOTHER-INFANT SELF- AND INTERACTIVE CONTINGENCY. Infant Mental Health Journal. 32: 174-206. PMID 25983359 DOI: 10.1002/Imhj.20274  0.035
2018 Gopal S, Lu Q, Man JJ, Baur W, Rao SP, Litichevskiy L, Papanastasiou M, Creech AL, DeRuff KC, Mullahoo J, Officer A, Egri SB, Davison D, Jaffe JD, Jaffe IZ. A phosphoproteomic signature in endothelial cells predicts vascular toxicity of tyrosine kinase inhibitors used in CML. Blood Advances. 2: 1680-1684. PMID 30021779 DOI: 10.1182/bloodadvances.2018020396  0.034
2019 Reynolds JW, Henshaw DS, Jaffe JD, Dobson SW, Edwards CJ, Turner JD, Weller RS, Graves BR, Freehill MT. Analgesic Benefit of Pectoral Nerve Block II Blockade for Open Subpectoral Biceps Tenodesis: A Randomized, Prospective, Double-Blinded, Controlled Trial. Anesthesia and Analgesia. PMID 31136331 DOI: 10.1213/ANE.0000000000004233  0.029
2010 Jaffe JH. A follow-up of vietnam drug users: origins and context of Lee Robins' classic study. The American Journal On Addictions / American Academy of Psychiatrists in Alcoholism and Addictions. 19: 212-4. PMID 20525025 DOI: 10.1111/j.1521-0391.2010.00043.x  0.029
2014 Chapel T, Jaffe J, Stock C. Design and construction of an earthen impoundment for water management Geotechnical Practice Publication. 69-81.  0.028
2012 Kelly SM, Schwartz RP, Oʼgrady KE, Gandhi D, Jaffe JH. Impact of methadone with versus without drug abuse counseling on HIV risk: 4- and 12-month findings from a clinical trial. Journal of Addiction Medicine. 6: 145-52. PMID 22134175 DOI: 10.1097/ADM.0b013e31823ae556  0.024
2013 Jaffe JD, Henshaw DS, Nagle PC. Ultrasound-guided continuous superficial peroneal nerve block below the knee for the treatment of nerve injury. Pain Practice : the Official Journal of World Institute of Pain. 13: 572-5. PMID 23241230 DOI: 10.1111/papr.12021  0.023
2015 Roba AC, Gabriel-Micheal K, Zello GA, Jaffe J, Whiting SJ, Henry CJ. A low pulse food intake may contribute to the poor nutritional status and low dietary intakes of adolescent girls in rural southern Ethiopia. Ecology of Food and Nutrition. 54: 240-54. PMID 25602600 DOI: 10.1080/03670244.2014.974593  0.021
2013 Schwartz RP, Gryczynski J, O'Grady KE, Sharfstein JM, Warren G, Olsen Y, Mitchell SG, Jaffe JH. Opioid agonist treatments and heroin overdose deaths in Baltimore, Maryland, 1995-2009. American Journal of Public Health. 103: 917-22. PMID 23488511 DOI: 10.2105/AJPH.2012.301049  0.02
2014 Schiff MH, Jaffe JS, Freundlich B. Head-to-head, randomised, crossover study of oral versus subcutaneous methotrexate in patients with rheumatoid arthritis: drug-exposure limitations of oral methotrexate at doses ≥15 mg may be overcome with subcutaneous administration. Annals of the Rheumatic Diseases. 73: 1549-51. PMID 24728329 DOI: 10.1136/annrheumdis-2014-205228  0.018
2009 Jaffe J, Castellucci S, Cathelineau X, Harmon J, Rozet F, Barret E, Vallancien G. Robot-assisted laparoscopic prostatectomy: a single-institutions learning curve. Urology. 73: 127-33. PMID 18952261 DOI: 10.1016/j.urology.2008.08.482  0.017
2012 Scerba MT, Bloom S, Haselton N, Siegler M, Jaffe J, Lectka T. Interaction of a C-F bond with the π-system of a C═C bond or "head on" with a proximate C-H bond. The Journal of Organic Chemistry. 77: 1605-9. PMID 22283798 DOI: 10.1021/Jo2024152  0.014
2012 Siu G, Jaffe JD, Rafique M, Weinik MM. Osteopathic manipulative medicine for carpal tunnel syndrome. The Journal of the American Osteopathic Association. 112: 127-39. PMID 22411967  0.014
2015 Jaffe JD, Huddleston LB. A Troubling Definition of the "Administration" of Anesthesia. Regional Anesthesia and Pain Medicine. 40: 390-1. PMID 26079357 DOI: 10.1097/AAP.0000000000000247  0.014
2009 Phon H, Jaffe J, Horrow J. Perioperative management of acute ischemic stroke: a case report. Journal of Clinical Anesthesia. 21: 602-5. PMID 20122594 DOI: 10.1016/j.jclinane.2009.01.010  0.014
2013 Scantling D, Ross C, Jaffe J. Primary clear cell adenocarcinoma of a urethral diverticulum treated with multidisciplinary robotic anterior pelvic exenteration. Case Reports in Medicine. 2013: 387591. PMID 24454400 DOI: 10.1155/2013/387591  0.012
2012 Cathala N, Mombet A, Sanchez-Salas R, Rozet F, Barret E, Giuliano F, Galiano M, Prapotnich D, Kazzazi A, Djavan B, Jaffe J, Cathelineau X, Vallancien G. Evaluation of erectile function after laparoscopic radical prostatectomy in a single center. The Canadian Journal of Urology. 19: 6328-35. PMID 22892254  0.011
2015 Jaffe JH. Interview with Dr Jerome H Jaffe. Drug and Alcohol Dependence. 149: 290-1. PMID 25941692  0.01
2014 Hepting DH, Jaffe JA, Maciag T. Operationalizing Ethics in Food Choice Decisions Journal of Agricultural and Environmental Ethics. 27: 453-469. DOI: 10.1007/s10806-013-9473-8  0.01
2014 Jaffe J. The reproductive story: Dealing with miscarriage, stillbirth, or other perinatal demise Women's Reproductive Mental Health Across the Lifespan. 159-176. DOI: 10.1007/978-3-319-05116-1_9  0.01
2013 Schwartz RP, Gryczynski J, O'Grady KE, Sharfstein JM, Warren G, Olsen YK, Mitchell SG, Jaffe JH. Schwartz et al. respond. American Journal of Public Health. 103: e2-3. PMID 23763406 DOI: 10.2105/AJPH.2013.301428  0.01
2013 Jaffe J. [Chimpanzee veterinarian in Sierra Leone]. Tijdschrift Voor Diergeneeskunde. 138: 244-5. PMID 23638561  0.01
2012 Jaffe JH. Joseph Vincent Brady (1922-2011): Behavioral neuropharmacologist, but so much more. Addiction (Abingdon, England). 107: 223-4. PMID 22151322 DOI: 10.1111/j.1360-0443.2011.03688.x  0.01
2012 Jaffe J, Melnychuk E, Muschelli J, Ziai W, Morgan T, Hanley DF, Awad IA. Ventricular catheter location and the clearance of intraventricular hemorrhage. Neurosurgery. 70: 1258-63; discussion . PMID 22067423 DOI: 10.1227/NEU.0b013e31823f6571  0.01
2011 Jaffe JK, Paladugu S, Gaughan JP, Parkman HP. Characteristics of nausea and its effects on quality of life in diabetic and idiopathic gastroparesis. Journal of Clinical Gastroenterology. 45: 317-21. PMID 20733513 DOI: 10.1097/MCG.0b013e3181eeb5e9  0.01
2010 Gal-Mor O, Valinsky L, Weinberger M, Guy S, Jaffe J, Schorr YI, Raisfeld A, Agmon V, Nissan I. Multidrug-resistant Salmonella enterica serovar Infantis, Israel. Emerging Infectious Diseases. 16: 1754-7. PMID 21029536 DOI: 10.3201/eid1611.100100  0.01
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